SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene58514

Length: 113 nt

UniGene Fasta

>sp_v3.0_unigene58514
ATGGGGAATCATAACCGGCGCAGCCAGCGGCATTGGAGAGACCACAGCTCGTCTCTTTGCGGCGCATGGCGCCCGGGTTCTGATAGCAGACGTGCAAGACGCCCAGAATCTGG

Ace file of the UniGene sp_v3.0_unigene58514

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	short-chain dehydrogenase/reductase protein [Lactuca sativa]	-	-	4.0e-06	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%

Source	Gene names
Sma3	GAD3; LsSDR1; POPTRDRAFT_561447; RCOM_0226140; yfe37;

Source	GOs	Term	Type	Identity
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	-
Sma3	Glucose/ribitol dehydrogenase	IPR002347	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002309404.1	predicted protein [Populus trichocarpa]	7.0e-11	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NU86

Fln msg: Distance to subject end: 225 aas, your sequence is shorter than subject: 37 - 289

Fln protein: WGIITGAASGIGETTARLFAAHGARVLIADVQDAQNL

Protein Length: 38

Fln nts: ATGGGGAATCATAACCGGCGCAGCCAGCGGCATTGGAGAGACCACAGCTCGTCTCTTTGCGGCGCATGGCGCCCGGGTTCTGATAGCAGACGTGCAAGACGCCCAGAATCTGG

Fln Alignment:

F5V9AAZ02HZIIJ___IITGAASGIGETTARLFAAHGARVLIADVQD
A9NU86_______________IITGGASGIGEAIVRLFTKHGAKVIIADIAD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain