UniGene Name: sp_v3.0_unigene58508
Length: 156 nt
UniGene Fasta |
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>sp_v3.0_unigene58508
C |
Ace file of the UniGene sp_v3.0_unigene58508 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Alcohol dehydrogenase (Fragment) n=1 Tax=Pinus banksiana RepID=Q43300_PINBN | - | - | 4.0e-14 | 97% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 91% |
Sma3 | Alcohol dehydrogenase | - | - | 9.628e-24 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Alcohol dehydrogenase. | EC:1.1.1.1 | - | 7.972e-40 | - |
Source | KEGGs | Term | Type | e value | Identity |
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Sma3 | Glycolysis / Gluconeogenesis | 00010 | 7.972e-40 | % | |
Sma3 | Fatty acid metabolism | 00071 | 7.972e-40 | % | |
Sma3 | Glycine, serine and threonine metabolism | 00260 | 7.972e-40 | % | |
Sma3 | Tyrosine metabolism | 00350 | 7.972e-40 | % | |
Sma3 | Chloroalkane and chloroalkene degradation | 00625 | 7.972e-40 | % | |
Sma3 | Naphthalene degradation | 00626 | 7.972e-40 | % | |
Sma3 | Retinol metabolism | 00830 | 7.972e-40 | % | |
Sma3 | Metabolism of xenobiotics by cytochrome P450 | 00980 | 7.972e-40 | % | |
Sma3 | Drug metabolism - cytochrome P450 | 00982 | 7.972e-40 | % | |
Sma3 | Metabolic pathways | 01100 | 7.972e-40 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 7.972e-40 | % |
Source | Gene names |
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Sma3 | ADH; ADH1; ADH2; ADH3; ADH6; Adh; Adh1; Adh1A; Adh1B; Adh1a; Adh2; AdhC1; AdhC2; AdhC3; AdhC4; AdhC5; AdhC6; AdhC7; AdhD; AdhE; At1g77120; F22K20.19; GSVIVT00014300001; GSVIVT00034830001; GSVIVT00034832001; GSVIVT00034833001; GSVIVT00034834001; POPTRDRAFT |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | alcohol dehydrogenase (NAD) activity | GO:0004022 | Molecular Function | 0.0 | - |
Sma3 | zinc ion binding | GO:0008270 | Molecular Function | 0.0 | - |
Sma3 | oxidoreductase activity | GO:0016491 | Molecular Function | 0.0 | - |
Sma3 | response to hypoxia | GO:0001666 | Biological Process | 0.0 | - |
Sma3 | response to salt stress | GO:0009651 | Biological Process | 0.0 | - |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Alcohol dehydrogenase superfamily, zinc-type | IPR002085 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase, zinc-type, conserved site | IPR002328 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase, C-terminal | IPR013149 | - | 0.0 | - |
Sma3 | Alcohol dehydrogenase GroES-like | IPR013154 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G77120.1 | ADH1, ADH, ATADH, ATADH1 alcohol dehydrogenase 1 chr1:28975509-28977216 FORWARD LENGTH=379 | 1.0e-16 | 86% |
RefSeq | Arabidopsis thaliana | NP_177837.1 | alcohol dehydrogenase class-P [Arabidopsis thaliana] | 2.0e-16 | 86% |
RefSeq | Populus trichocarpa | XP_002309900.1 | predicted protein [Populus trichocarpa] | 6.0e-17 | 91% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9NTN9
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 269 aas, your sequence is shorter than subject: 51 - 382
Fln protein:
L
Protein Length:
52
Fln nts:
C
Fln Alignment:
F5V9AAZ02IATQ0___IVESVGEGVTDLKEGDTVLPVFTGECGECRHCKSEES
A9NTN9_______________VIESVGEGVTDLKEGDSVLPVFTGECGECRHCKSEES
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain