SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene58081

Length: 227 nt

UniGene Fasta

>sp_v3.0_unigene58081
CAATTCCGTTATGCAGAATTTGCTTGCATTGGATGTGCTTCGTGACCATTTCATGAAACCCTCACAACTTCCCGAAGGACCAATAACTTCGGCTCTGAGGAAGCTGTATGTGGAAACAAGTTTAGAGGGGCTGAGGCAAGGTGATGACAATGGATTTAAAAAGGGGATGAAAGGTATTGGAGCGATCAGCCCCAAGGTTCTTTTTGGAGCTATTGTGCCAAGGCTTC

Ace file of the UniGene sp_v3.0_unigene58081

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KE85_ARALL	-	-	6.0e-06	45%
FL-Next	sp=Ubiquitin carboxyl-terminal hydrolase 2; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	43%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q8W4N3

Fln msg: Distance to subject end: 656 aas, your sequence is shorter than subject: 75 - 961

Fln protein: NSVMQNLLALDVLRDHFMKPSQLPEGPITSALRKLYVETSLEGLRQGDDNGFKKGMKGIGAISPKVLFGAIVPRL

Protein Length: 76

Fln nts: CAATTCCGTTATGCAGAATTTGCTTGCATTGGATGTGCTTCGTGACCATTTCATGAAACCCTCACAACTTCCCGAAGGACCAATAACTTCGGCTCTGAGGAAGCTGTATGTGGAAACAAGTTTAGAGGGGCTGAGGCAAGGTGATGACAATGGATTTAAAAAGGGGATGAAAGGTATTGGAGCGATCAGCCCCAAGGTTCTTTTTGGAGCTATTGTGCCAAGGCTTC

Fln Alignment:

F51TW9001DB7Z9___NSVMQNLLALDVLRDHFMKPS-QLPEGPITSALRKLYVETSLEGLRQGDDNGFKKGMKGIGAISPKVLFGA
Q8W4N3_______________NSIMQNLLSLDRLRDHFLKENGSGVGGPLASSLRKLFTETKPEA-----------GLKSV--INPRAFFGS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain