SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene57519

Length: 223 nt

UniGene Fasta

>sp_v3.0_unigene57519
TACTATGGAGCAGGAGGAGGAGTCGCGGTTCACTTCGACTCAGTCGGCGTCGAGCATAATGTCGAAGCTGGAGGAGATTGCAAGCCTATTCCGGTTCAGCTTCAAGAAGTCCAAGGACTTCAAGATGAAGTTGCAGGGGTCGGAGCAGGGGCGGAAGGGGCACTTGTCTATTGATGCCGAGATTTTTGAGGTCACTCCCTCGTTTTTCATGGTCGAGCTTCGG

Ace file of the UniGene sp_v3.0_unigene57519

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CBL-interacting protein kinase [Hordeum brevisubulatum]	-	-	1.0e-11	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%
Sma3	CBL-interacting serine/threonine-protein kinase, putative	-	-	5.695e-09	-

Source	ECs	Term	Type	e value	Identity
Sma3	Calcium/calmodulin-dependent protein kinase.	EC:2.7.11.17	-	3.465e-07	-

Source	Gene names
Sma3	CIPK11; CIPK24; CIPK25; CIPK5; CIPK7; CIPK8; CIPK9; GSVIVT00013357001; GSVIVT00028341001; GSVIVT00029411001; GSVIVT00035858001; GSVIVT00037468001; OsI_00833; PHYPADRAFT_107706; PHYPADRAFT_116176; POPTRDRAFT_1117122; POPTRDRAFT_259463; POPTRDRAFT_660765; P

Source	GOs	Term	Type	Identity
Sma3	protein kinase activity	GO:0004672	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	signal transduction	GO:0007165	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	NAF domain	IPR004041	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	NAF/FISL domain	IPR018451	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G45820.1	CIPK20, SnRK3.6, PKS18 CBL-interacting protein kinase 20 chr5:18587081-18588400 REVERSE LENGTH=439	6.0e-13	47%
RefSeq	Arabidopsis thaliana	NP_199394.1	CBL-interacting serine/threonine-protein kinase 20 [Arabidopsis thaliana]	8.0e-13	47%
RefSeq	Populus trichocarpa	XP_002323059.1	predicted protein, partial [Populus trichocarpa]	9.0e-15	52%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A9K4

Fln msg: Distance to subject end: 36 aas, your sequence is shorter than subject: 74 - 431

Fln protein: TMEQEEESRFTSTQSASSIMSKLEEIASLFRFSFKKSKDFKMKLQGSEQGRKGHLSIDAEIFEVTPSFFMVELR

Protein Length: 75

Fln nts: TACTATGGAGCAGGAGGAGGAGTCGCGGTTCACTTCGACTCAGTCGGCGTCGAGCATAATGTCGAAGCTGGAGGAGATTGCAAGCCTATTCCGGTTCAGCTTCAAGAAGTCCAAGGACTTCAAGATGAAGTTGCAGGGGTCGGAGCAGGGGCGGAAGGGGCACTTGTCTATTGATGCCGAGATTTTTGAGGTCACTCCCTCGTTTTTCATGGTCGAGCTTCGG

Fln Alignment:

F5X2MQL01A1DEA___MEQEEESRFTSTQSASSIMSKLEEIAXXXXXXXXXXXXXXXXLQGSEQGRKGHLSIDAEIFEVTPSFFMVELR
D5A9K4_______________LKQEEESRFTSTQPASSIMSKLEEIASLFRFSFKKSKDFKMKLQGSEQGRKGHLSIDAEIFEVTPSFFMVELR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain