SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene57354

Length: 147 nt

UniGene Fasta

>sp_v3.0_unigene57354
ATGGGGATCTAGGGTTACATGGGTCTCAACACCGCCATTTTCACCGACCTCTGTACTGCCCTCTTTGCAAGCAACCCATCTGCTTTTGTGCTTATGCTCACCCTTATTCTGGGCATCGTTTATACAATCTCTTTATATTTTAGCCTA

Ace file of the UniGene sp_v3.0_unigene57354

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative nodulin protein [Arabidopsis thaliana] gb\|AAD24599.1\| nodulin-like protein [Arabidopsis thaliana] gb\|AAL49867.1\| putative nodulin protein [Arabidopsis thaliana] gb\|AAM19945.1\| At2g16660/T24I21.7 [Arabidopsis thaliana] gb\|AAN33210.1\| At2g16660/T24	-	-	2.0e-05	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	74%

Source	InterPros	Term	Type	e value	Identity
Sma3	Nodulin-like	IPR010658	-	0.0	-
Sma3	Major facilitator superfamily	IPR011701	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002327657.1	predicted protein [Populus trichocarpa]	2.0e-11	58%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LRH5

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 429 aas, your sequence is shorter than subject: 49 - 626

Fln protein: MGI*GYMGLNTAIFTDLCTALFASNPSAFVLMLTLILGIVYTISLYFSL

Protein Length: 50

Fln nts: ATGGGGATCTAGGGTTACATGGGTCTCAACACCGCCATTTTCACCGACCTCTGTACTGCCCTCTTTGCAAGCAACCCATCTGCTTTTGTGCTTATGCTCACCCTTATTCTGGGCATCGTTTATACAATCTCTTTATATTTTAGCCTA

Fln Alignment:

F5X2MQL01C6FCC___GYMGLNTAIFTDLCTALFASNPSAFVLMLTLILGIVYTISLYF
B8LRH5_______________GYIGLSTAIFTDLCSALFASSPSSFVLMLTLIPGIVCVTSMIF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain