SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene56652

Length: 116 nt

UniGene Fasta

>sp_v3.0_unigene56652
CGTCTGGGTCAACACCTACAACACCCTCCACCACCAGCTTCCATTCGGTGGCTTCAAGGAGTCCGGTATCGGCCGTGAGCTCGGCGAGGACGCCCTTGCCAACTACACACAGACCA

Ace file of the UniGene sp_v3.0_unigene56652

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Aldehyde dehydrogenase n=1 Tax=Passalora fulva RepID=Q9P303_CLAFU	-	-	2.0e-15	100%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	51%

Source	Gene names
Sma3	CHLREDRAFT_135609;

Source	GOs	Term	Type	e value	Identity
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Aldehyde dehydrogenase domain	IPR015590	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Aldehyde dehydrogenase, N-terminal	IPR016162	-	-

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NV57

Fln msg: STOP codon was not found. Distance to subject end: 13 aas, your sequence is shorter than subject: 38 - 248

Fln protein: VWVNTYNTLHHQLPFGGFKESGIGRELGEDALANYTQT

Protein Length: 39

Fln nts: CGTCTGGGTCAACACCTACAACACCCTCCACCACCAGCTTCCATTCGGTGGCTTCAAGGAGTCCGGTATCGGCCGTGAGCTCGGCGAGGACGCCCTTGCCAACTACACACAGACCA

Fln Alignment:

F51TW9002FCBEY___VWVNTYNTLHHQLPFGGFKESGIGRELGEDALANYTQ
A9NV57_______________VWINCFLVLGADVPMGGYKMSGIGREYGSKGLENYLQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain