UniGene Name: sp_v3.0_unigene54565
Length: 195 nt
UniGene Fasta |
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>sp_v3.0_unigene54565
A |
Ace file of the UniGene sp_v3.0_unigene54565 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | BZip protein AtbZip21 n=3 Tax=Arabidopsis thaliana RepID=Q0WT94_ARATH | - | - | 4.0e-16 | 78% |
FL-Next | sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). | - | - | 0.0 | 89% |
Sma3 | BZIP transcription factor | - | - | 9.59e-22 | - |
Source | Gene names |
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Sma3 | 80A08_2; ASF-1/G13; AT5G65210; At1g08320; At1g22070; At1g68640; At1g68640/F24J5_9; At1g77920; At3g12250; At5g06839; At5g06960; At5g10030; At5g65210; AtbZIP21; AtbZIP65; BZIP22; BZIP26; BZIP45; BZIP47; BZIP50; BZIP57; CdR15; D11; F24J5.12; F2E2.14; GSVIVT0 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | sequence-specific DNA binding transcription factor activity | GO:0003700 | Molecular Function | 0.0 | - |
Sma3 | glycine hydroxymethyltransferase activity | GO:0004372 | Molecular Function | 0.0 | - |
Sma3 | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | - |
Sma3 | GTPase activator activity | GO:0005096 | Molecular Function | 0.0 | - |
Sma3 | identical protein binding | GO:0042802 | Molecular Function | 0.0 | - |
Sma3 | sequence-specific DNA binding | GO:0043565 | Molecular Function | 0.0 | - |
Sma3 | protein dimerization activity | GO:0046983 | Molecular Function | 0.0 | - |
Sma3 | regulation of transcription, DNA-dependent | GO:0006355 | Biological Process | 0.0 | - |
Sma3 | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | - |
Sma3 | glycine metabolic process | GO:0006544 | Biological Process | 0.0 | - |
Sma3 | L-serine metabolic process | GO:0006563 | Biological Process | 0.0 | - |
Sma3 | signal transduction | GO:0007165 | Biological Process | 0.0 | - |
Sma3 | response to xenobiotic stimulus | GO:0009410 | Biological Process | 0.0 | - |
Sma3 | defense response, incompatible interaction | GO:0009814 | Biological Process | 0.0 | - |
Sma3 | salicylic acid mediated signaling pathway | GO:0009863 | Biological Process | 0.0 | - |
Sma3 | defense response to bacterium | GO:0042742 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Armadillo | IPR000225 | - | 0.0 | - |
Sma3 | Serine hydroxymethyltransferase | IPR001085 | - | 0.0 | - |
Sma3 | ThiJ/PfpI | IPR002818 | - | 0.0 | - |
Sma3 | Basic-leucine zipper domain | IPR004827 | - | 0.0 | - |
Sma3 | TIP41-like protein | IPR007303 | - | 0.0 | - |
Sma3 | bZIP transcription factor, bZIP-1 | IPR011616 | - | 0.0 | - |
Sma3 | Domain of unknown function DUF1605 | IPR011709 | - | 0.0 | - |
Sma3 | Armadillo-like helical | IPR011989 | - | 0.0 | - |
Sma3 | Glycoside hydrolase, family 11, active site | IPR018208 | - | 0.0 | - |
Sma3 | DNA/RNA non-specific endonuclease, active site | IPR018524 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G08320.1 | TGA9, bZIP21 bZIP transcription factor family protein chr1:2622113-2627451 REVERSE LENGTH=481 | 1.0e-21 | 78% |
RefSeq | Arabidopsis thaliana | NP_001030998.1 | bZIP transcription factor-like protein [Arabidopsis thaliana] | 5.0e-22 | 78% |
RefSeq | Populus trichocarpa | XP_002322683.1 | predicted protein, partial [Populus trichocarpa] | 4.0e-22 | 91% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: O24160
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 241 aas, your sequence is shorter than subject: 65 - 456
Fln protein:
I
Protein Length:
66
Fln nts:
A
Fln Alignment:
F51TW9002F730Y___QTLRRLAQNREAAKKSRLRKKAYVQQLESSRMKLSQLEQDLQRARTQG
O24160_______________KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQDLQRARQQG
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain