SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene53999

Length: 200 nt

UniGene Fasta

>sp_v3.0_unigene53999
ATGGGGAGAGTCTGCCAAGATTCTTTCGGCAGCTTGTCCAACCTCCACAGCTTGGACCTGTCTGGGTGCGAACAAATTGGAGAGGCTGCCAGATTCTTTAGGCAGCTTGTCGAACCTCCACAGCTTGTACCTTTCTGTGTGCGAAAAATCGGAGAGGCTGCCAGATTCTTTCGGCAGCTTGTCGAAACCTCCACAGCCTG

Ace file of the UniGene sp_v3.0_unigene53999

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare RepID=F2DBI7_HORVD	-	-	9.0e-09	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	55%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AB91

Fln msg: warning!, putative chimeric sequence! or repetitive structureDistance to subject end: 409 aas, atg_distance in limit (1-15): atg_distance = 8, your sequence is shorter than subject: 67 - 482

Fln protein: MGRVCQDSFGSLSNLHSLDLSxxxxxxERLPDSLGSLSNLHSLYLSVCEKSERLPDSFGSLSKPPQP

Protein Length: 68

Fln nts: _-_ATGGGGAGAGTCTGCCAAGATTCTTTCGGCAGCTTGTCCAACCTCCACAGCTTGGACCTGTCTxxxxxxxxxxxxxxxxxxGAGAGGCTGCCAGATTCTTTAGGCAGCTTGTCGAACCTCCACAGCTTGTACCTTTCTGTGTGCGAAAAATCGGAGAGGCTGCCAGATTCTTTCGGCAGCTTGTCGAAACCTCCACAGCCTG

Fln Alignment:

F585NNT02IBUFD___DSFGSLSNLHSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxERLPDSFGSLS
D5AB91_______________DSFCNLTNLHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxERLPDSFGTLT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain