SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene53219

Length: 92 nt

UniGene Fasta

>sp_v3.0_unigene53219
AAAGAGTTGTTGGCCATGGTCTGAATGCCCAGGAACTTGCAAGAAATCCCAGGCTTGATTATTTCTTTGTGAATGATTTGAATGAGGATCAG

Ace file of the UniGene sp_v3.0_unigene53219

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb\|AAF01549.1\|AC009325_19 hypothetical protein [Arabidopsis thaliana] gb\|AAR20756.1\| At3g01660 [Arabidopsis thaliana] gb\|AAS92343.1\| At3g01660 [Arabidopsis t	-	-	8.0e-09	93%
FL-Next	tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).	-	-	0.0	93%

Source	Gene names
Sma3	At3g01660; F4P13.20; GSVIVT00020625001; H0510A06.4; OSIGBa0158F13.15; OSJNBb0011N17.9; Os04g0481300; OsI_16345; OsJ_15214; POPTRDRAFT_842663; RCOM_0532510; VITISV_005967;

Source	GOs	Term	Type	e value	Identity
Sma3	methyltransferase activity	GO:0008168	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Methyltransferase type 11	IPR013216	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G01660.1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein chr3:245532-246432 FORWARD LENGTH=273	7.0e-14	93%
RefSeq	Arabidopsis thaliana	NP_186815.1	S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana]	9.0e-14	93%
RefSeq	Populus trichocarpa	XP_002298567.1	predicted protein [Populus trichocarpa]	2.0e-13	90%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7MWY2

Fln msg: Distance to subject end: 46 aas, your sequence is shorter than subject: 30 - 103

Fln protein: RVVGHGLNAQELARNPRLDYFFVNDLNEDQ

Protein Length: 31

Fln nts: AAAGAGTTGTTGGCCATGGTCTGAATGCCCAGGAACTTGCAAGAAATCCCAGGCTTGATTATTTCTTTGTGAATGATTTGAATGAGGATCAG

Fln Alignment:

F51TW9001ATNC8___RVVGHGLNAQELARNPRLDYFFVNDLNEDQ
D7MWY2_______________KVVGHGLNAQELARNPRLDYFFVKDLNEDQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain