SustainPineDB

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Assembly info
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene53131

Length: 106 nt

UniGene Fasta

>sp_v3.0_unigene53131
TCTTGCTTGGTTACTTAATGGGTAATCTAGAAATTGATGTGATTGGTGGCTGGCGATACATGTATGGCTTGAGCACACCATTGCTGTAATCGTTGGGTATTGGCAT

Ace file of the UniGene sp_v3.0_unigene53131

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative sugar transporter n=1 Tax=Nicotiana langsdorffii x Nicotiana sanderae RepID=Q07A14_NICLS	-	-	4.0e-05	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%

Source	GOs	Term	Type	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	substrate-specific transmembrane transporter activity	GO:0022891	Molecular Function	-
Sma3	transmembrane transport	GO:0055085	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Lipocalin	IPR002345	-	-
Sma3	Sugar/inositol transporter	IPR003663	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NWB2

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 279 aas, your sequence is shorter than subject: 29 - 521

Fln protein: LLGYLMGNLEIDVIGGWRYMYGLSTPLL*

Protein Length: 30

Fln nts: TCTTGCTTGGTTACTTAATGGGTAATCTAGAAATTGATGTGATTGGTGGCTGGCGATACATGTATGGCTTGAGCACACCATTGCTGTAATCGTTGGGTATTGGCAT

Fln Alignment:

F5X2MQL01CHA9A___LLGYLMGNLEIDVIGGWRYMYGLSTPLL*SLGIG
A9NWB2_______________LLGYLMGNLEIDVIGGWRYMYGLSTPIAVILGIG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain