UniGene Name: sp_v3.0_unigene53100
Length: 224 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
UniGene Fasta (sense) |
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>sp_v3.0_unigene53100
T |
Ace file of the UniGene sp_v3.0_unigene53100 (antisense) |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
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AutoFact | CBL-interacting protein kinase 1 (Fragment) n=2 Tax=core eudicotyledons RepID=E1APF1_IPONI | - | - | 2.0e-11 | 80% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 82% |
Sma3 | CBL-interacting serine/threonine-protein kinase, putative | - | - | 4.175e-33 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Non-specific serine/threonine protein kinase. | EC:2.7.11.1 | - | 7.66e-37 | - |
Sma3 | Calcium/calmodulin-dependent protein kinase. | EC:2.7.11.17 | - | 8.208e-27 | - |
Source | Gene names |
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Sma3 | ACRE216; ATPK10; At1g01140; At1g29230; At1g30270; At1g48260; At2g26980; At3g17510; At3g23000; At4g14580; At5g01810; At5g01820; At5g10930; At5g25110; B1131G08.36; CIPK; CIPK1; CIPK12; CIPK13; CIPK14; CIPK15; CIPK16; CIPK17; CIPK18; CIPK19; CIPK21; CIPK22; |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | nucleus | GO:0005634 | Cellular Component | 0.0 | - |
Sma3 | cytoplasm | GO:0005737 | Cellular Component | 0.0 | - |
Sma3 | vacuole | GO:0005773 | Cellular Component | 0.0 | - |
Sma3 | cytosol | GO:0005829 | Cellular Component | 0.0 | - |
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | protein kinase activity | GO:0004672 | Molecular Function | 0.0 | - |
Sma3 | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | - |
Sma3 | potassium channel activity | GO:0005267 | Molecular Function | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | manganese ion binding | GO:0030145 | Molecular Function | 0.0 | - |
Sma3 | potassium ion binding | GO:0030955 | Molecular Function | 0.0 | - |
Sma3 | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | - |
Sma3 | signal transduction | GO:0007165 | Biological Process | 0.0 | - |
Sma3 | response to nutrient | GO:0007584 | Biological Process | 0.0 | - |
Sma3 | response to water deprivation | GO:0009414 | Biological Process | 0.0 | - |
Sma3 | response to abiotic stimulus | GO:0009628 | Biological Process | 0.0 | - |
Sma3 | response to salt stress | GO:0009651 | Biological Process | 0.0 | - |
Sma3 | response to cytokinin stimulus | GO:0009735 | Biological Process | 0.0 | - |
Sma3 | response to abscisic acid stimulus | GO:0009737 | Biological Process | 0.0 | - |
Sma3 | abscisic acid mediated signaling pathway | GO:0009738 | Biological Process | 0.0 | - |
Sma3 | negative regulation of abscisic acid mediated signaling pathway | GO:0009788 | Biological Process | 0.0 | - |
Sma3 | potassium ion import | GO:0010107 | Biological Process | 0.0 | - |
Sma3 | stomatal movement | GO:0010118 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | Protein kinase, catalytic domain | IPR000719 | - | 0.0 | - |
Sma3 | Serine/threonine- / dual-specificity protein kinase, catalytic domain | IPR002290 | - | 0.0 | - |
Sma3 | NAF domain | IPR004041 | - | 0.0 | - |
Sma3 | Serine/threonine-protein kinase, active site | IPR008271 | - | 0.0 | - |
Sma3 | Protein kinase, ATP binding site | IPR017441 | - | 0.0 | - |
Sma3 | IPR017442 | - | 0.0 | - | |
Sma3 | EF-Hand 1, calcium-binding site | IPR018247 | - | 0.0 | - |
Sma3 | Ribosomal protein S14, conserved site | IPR018271 | - | 0.0 | - |
Sma3 | NAF/FISL domain | IPR018451 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G30270.1 | CIPK23, SnRK3.23, ATCIPK23, LKS1 CBL-interacting protein kinase 23 chr1:10655270-10658524 FORWARD LENGTH=482 | 7.0e-16 | 80% |
RefSeq | Arabidopsis thaliana | NP_564353.1 | CBL-interacting serine/threonine-protein kinase 23 [Arabidopsis thaliana] | 9.0e-16 | 80% |
RefSeq | Populus trichocarpa | XP_002325185.1 | predicted protein, partial [Populus trichocarpa] | 8.0e-16 | 80% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: A9NWA3
Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 225 aas, your sequence is shorter than subject: 74 - 426
Fln protein:
V
Protein Length:
75
Fln nts:
T
Fln Alignment:
F5X2MQL01CCT3I___FRKDGLLHTACGTPNYVAPEVITMKGYEGAKETDIWSCGVI
A9NWA3_______________FRQDGLLHTACGTPAYVSPEVITKKGYDGAK-ADIWSCGVI
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain