SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene53033

Length: 172 nt

UniGene Fasta

>sp_v3.0_unigene53033
ACATTTCTGAAATCTGTCGTGGATAAAAAGCAATTGTAGGCATCCTTGAAGCTTACTTGCCTCAGCTTGCTCTGATTCTCTTCTTATATTTCTTGCCTACAATTCTCATGATCCTCTCCAAGGCTAAAGGGATTCCTTCAGAGAGCCATGCAGTGAGAGCTTCGTCTGGAAT

Ace file of the UniGene sp_v3.0_unigene53033

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Early-responsive to dehydration stress protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDK3_PICAB	-	-	4.0e-14	85%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	72%
Sma3	ERD4 protein	-	-	1.411e-09	-

Source	Gene names
Sma3	At1g30360; ERD; ERD4; GSVIVT00028360001; PHYPADRAFT_180964; POPTRDRAFT_1069914; RCOM_1288500; T4K22.4; VITISV_037471;

Source	GOs	Term	Type	Identity
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast envelope	GO:0009941	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Domain of unknown function DUF221	IPR003864	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G30360.1	ERD4 Early-responsive to dehydration stress protein (ERD4) chr1:10715892-10718799 FORWARD LENGTH=724	1.0e-13	63%
RefSeq	Arabidopsis thaliana	NP_564354.1	Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana]	2.0e-13	63%
RefSeq	Populus trichocarpa	XP_002300337.1	predicted protein [Populus trichocarpa]	2.0e-13	65%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A5C7W9

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 216 aas, your sequence is shorter than subject: 56 - 676

Fln protein: ISEICRG*KAIVGILEAYLPQLALILFLYFLPTILMILSKAKGIPSESHAVRASSG

Protein Length: 57

Fln nts: ACATTTCTGAAATCTGTCGTGGATAAAAAGCAATTGTAGGCATCCTTGAAGCTTACTTGCCTCAGCTTGCTCTGATTCTCTTCTTATATTTCTTGCCTACAATTCTCATGATCCTCTCCAAGGCTAAAGGGATTCCTTCAGAGAGCCATGCAGTGAGAGCTTCGTCTGGAAT

Fln Alignment:

F5X2MQL01B5Z0U___AIVGILEAYLPQLALILFLYFLPTILMILSKAKGIPSESHAVRASSG
A5C7W9_______________AIKTVLEAYLPQLALIIFLALLPKLLLYLSKAEGIPSQSHAVRAASG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain