SustainPineDB

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Assembly info
Unigenes
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene52579

Length: 220 nt

UniGene Fasta

>sp_v3.0_unigene52579
ATGGGGCCATTGATAACATGGCCCCTGGCCGCAGATCAATACTATAATGCTAGGTTATTGGTTGAATCTCTTAAGATTGGAGTAAGGTTTTGTGAAGGTGCCACCACGGTGCCCAACAGAGATGACCTGAGAATTGCAATTAAGCGGCTGCTGGGAAGAGAAGGAGAAGAAATGAAAAGAGCAGAGGAGCTGAGCAAGGCGGCGAGAACAGCAGTGCAAG

Ace file of the UniGene sp_v3.0_unigene52579

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RLH6_RICCO	-	-	2.0e-10	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%

Source	GOs	Term	Type	e value	Identity
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G73880.1	UGT89B1 UDP-glucosyl transferase 89B1 chr1:27785143-27786564 FORWARD LENGTH=473	4.0e-14	49%
RefSeq	Arabidopsis thaliana	NP_177529.2	UDP-glucosyl transferase 89B1 [Arabidopsis thaliana]	5.0e-14	49%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NX38

Fln msg: Distance to subject end: 24 aas, your sequence is shorter than subject: 73 - 468

Fln protein: MGPLITWPLAADQYYNARLLVESLKIGVRFCEGATTVPNRDDLRIAIKRLLGREGEEMKRAEELSKAARTAVQ

Protein Length: 74

Fln nts: ATGGGGCCATTGATAACATGGCCCCTGGCCGCAGATCAATACTATAATGCTAGGTTATTGGTTGAATCTCTTAAGATTGGAGTAAGGTTTTGTGAAGGTGCCACCACGGTGCCCAACAGAGATGACCTGAGAATTGCAATTAAGCGGCTGCTGGGAAGAGAAGGAGAAGAAATGAAAAGAGCAGAGGAGCTGAGCAAGGCGGCGAGAACAGCAGTGCAAG

Fln Alignment:

F51TW9002JT6M1___PLITWPLAADQYYNARLLVESLKIGVRFCEGATTVPNRDDLRIAIKRLLGREGEEMKRAEELSKAARTAVQ
A9NX38_______________PLITWPMAADQYYNARLLVEYLKVGVRFCEGATTVPNRDDWRIAVKRLLAREGEEMKRAEELSKAARIAVQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain