SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene51947

Length: 441 nt

UniGene Fasta

>sp_v3.0_unigene51947
ACACATTCCATGCAAGGAGCGATGCTCCAGAGATCTCCCATGTGGTCATCAATGCATGGCCGGTTGCTCCGAGAACTGCCCTCCCTGCAAGTATCCTTGCGAAAAACGTTGCTTGCATAGTCGCTGCACTTTTATCTGCGGAAGCTTATGCACGCCTTGCATGGAGAAATGTGACTGGAAATGCCAACATCATACTTGTGATCTCCTTTGCCATGAAACTTGCACCAGACCACGTTGTGAGGAACCTTGCCAAGAAATTCGAAGGTGTGGTCATCCGTGTATAGGTCTATGCGGGGAGCCCTGCCCCAGGGTCTGCAGGATTTGCTATCCCAAGCATTTGGATGTCATTACGCAGATGACTTTAGAAGAGCTTGTAGACTGTGGACATGTATTTGGAGTAAGTGGGCTAGATACTTGGATGGACATGGACGGATGCAGTAG

Ace file of the UniGene sp_v3.0_unigene51947

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NFX1-type zinc finger-containing protein 1 [Rattus norvegicus] gb\|AAP92542.1\| Ab1-133 [Rattus norvegicus]	-	-	4.06377e-44	48%
FL-Next	sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	33%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9SY59

Fln msg: Distance to subject end: 368 aas, your sequence is shorter than subject: 146 - 1188

Fln protein: HIPCKERCSRDLPCGHQCMAGCSENCPPCKYPCEKRCLHSRCTFICGSLCTPCMEKCDWKCQHHTCDLLCHETCTRPRCEEPCQEIRRCGHPCIGLCGEPCPRVCRICYPKHLDVITQMTLEELVDCGHVFGVSGLDTWMDMDGCS

Protein Length: 147

Fln nts: ACACATTCCATGCAAGGAGCGATGCTCCAGAGATCTCCCATGTGGTCATCAATGCATGGCCGGTTGCTCCGAGAACTGCCCTCCCTGCAAGTATCCTTGCGAAAAACGTTGCTTGCATAGTCGCTGCACTTTTATCTGCGGAAGCTTATGCACGCCTTGCATGGAGAAATGTGACTGGAAATGCCAACATCATACTTGTGATCTCCTTTGCCATGAAACTTGCACCAGACCACGTTGTGAGGAACCTTGCCAAGAAATTCGAAGGTGTGGTCATCCGTGTATAGGTCTATGCGGGGAGCCCTGCCCCAGGGTCTGCAGGATTTGCTATCCCAAGCATTTGGATGTCATTACGCAGATGACTTTAGAAGAGCTTGTAGACTGTGGACATGTATTTGGAGTAAGTGGGCTAGATACTTGGATGGACATGGACGGATGCAGTAG

Fln Alignment:

F51TW9001BNCYE___CKERCSRDLPCGHQCMAGCS-ENCPPCKYPCEKRCLHS--------------RCTFICGSLCTPCMEKCDWKCQHHTCDLLCH-ETCTRPRCEEPCQEIRR-CGHPCIGLC--GEPCP
Q9SY59_______________CQLPCPIPQPCGHSDTHGCHFGDCPPCSTPVEKKCVGGHVVLRNIPCGLKDIRCTKICGKTRRCGMHACARTCHPEPCDSFNESEAGMRVTCRQKCGAPRTDCRHTCAALCHPSAPCP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain