SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene51793

Length: 253 nt

UniGene Fasta

>sp_v3.0_unigene51793
CAAGTTTAAGATCGGCATCAACATTGCAGAAGCATTACTTGAAACAATTGACCGTATTGGGCCATACAATGTCATCCAAGTCATCACTAATAATTCTCCTAATTGTAAGGCAGCAGGAGCAATTATTGAGGATAAATACCCCAACATATTTTGGTCTGGATGTTTGGTTCACACATTGAACCTTCTGATGCATGATGTTGTCAAGAACAAAAATGCACAATACTAATGGATTGGTGATTTGTACAACAAAGGC

Ace file of the UniGene sp_v3.0_unigene51793

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q5KQK8_ORYSJ	-	-	8.0e-14	44%
FL-Next	tr=Putative uncharacterized protein Sb08g007560; Sorghum bicolor (Sorghum) (Sorghum vulgare).	-	-	0.0	50%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: C5YTV3

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 383 aas, your sequence is shorter than subject: 75 - 713

Fln protein: KFKIGINIAEALLETIDRIGPYNVIQVITNNSPNCKAAGAIIEDKYPNIFWSGCLVHTLNLLMHDVVKNKNAQY*

Protein Length: 76

Fln nts: CAAGTTTAAGATCGGCATCAACATTGCAGAAGCATTACTTGAAACAATTGACCGTATTGGGCCATACAATGTCATCCAAGTCATCACTAATAATTCTCCTAATTGTAAGGCAGCAGGAGCAATTATTGAGGATAAATACCCCAACATATTTTGGTCTGGATGTTTGGTTCACACATTGAACCTTCTGATGCATGATGTTGTCAAGAACAAAAATGCACAATACTAATGGATTGGTGATTTGTACAACAAAGGC

Fln Alignment:

F51TW9001B57VB___IAEALLETIDRIGPYNVIQVITNNSPNCKAAGAIIEDKYPNIFWSGCLVHTLNLLMHDVVKNK
C5YTV3_______________IAEKLIQVVEEVGPKNVVQIITDNAANCKGAGLIVQQKYDNIFWTPCIVHTLNLALKNICAAK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain