SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene51608

Length: 663 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene51608 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Multidrug resistance-associated protein 1, 3 (Mrp1, 3), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SN54_RICCO	-	-	1.0e-16	80%
FL-Next	sp=ABC transporter C family member 8; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	73%
Sma3	Multidrug resistance protein ABC transporter family	-	-	0.0	-

Source	ECs	Term	Type	e value	Identity
Sma3	2-alkenal reductase.	EC:1.3.1.74	-	8.846e-09	-
Sma3	Xenobiotic-transporting ATPase.	EC:3.6.3.44	-	2.52e-31	-

Source	Gene names
Sma3	At1g04120; At1g71330; At2g47800; At3g13080; At3g13090; At3g13100; At3g21250; At3g59140; At3g60160; At3g60970; At3g62700; B1065G12.13; B1157F09.14; CHLREDRAFT_141872; EST2; EST3; F17A22.19; F17J16.190; F20D22.11; F26K9.130; F3I17.2; GSVIVT00002476001; GSVI

Source	GOs	Term	Type	Identity
Sma3	plant-type vacuole	GO:0000325	Cellular Component	-
Sma3	vacuolar membrane	GO:0005774	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	apoplast	GO:0048046	Cellular Component	-
Sma3	DNA binding	GO:0003677	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	sulfonylurea receptor activity	GO:0008281	Molecular Function	-
Sma3	folic acid transporter activity	GO:0008517	Molecular Function	-
Sma3	xenobiotic-transporting ATPase activity	GO:0008559	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	chlorophyll catabolite transmembrane transporter activity	GO:0010290	Molecular Function	-
Sma3	protein disulfide oxidoreductase activity	GO:0015035	Molecular Function	-
Sma3	glutathione S-conjugate-exporting ATPase activity	GO:0015431	Molecular Function	-
Sma3	ATPase activity	GO:0016887	Molecular Function	-
Sma3	ATPase activity, coupled to transmembrane movement of substances	GO:0042626	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-
Sma3	response to water deprivation	GO:0009414	Biological Process	-
Sma3	response to wounding	GO:0009611	Biological Process	-
Sma3	response to nematode	GO:0009624	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	stomatal movement	GO:0010118	Biological Process	-
Sma3	DNA integration	GO:0015074	Biological Process	-
Sma3	cellular potassium ion homeostasis	GO:0030007	Biological Process	-
Sma3	cell redox homeostasis	GO:0045454	Biological Process	-
Sma3	response to other organism	GO:0051707	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Neuraxin/MAP1B repeat	IPR000102	-	-
Sma3	Aminotransferase, class V/Cysteine desulfurase	IPR000192	-	-
Sma3	Histidine phosphatase superfamily, clade-2	IPR000560	-	-
Sma3	Serine/threonine dehydratase, pyridoxal-phosphate-binding site	IPR000634	-	-
Sma3	ABC transporter, transmembrane domain	IPR001140	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Glutaredoxin	IPR002109	-	-
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	ABC transporter, integral membrane type 1	IPR017940	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3	Ribosomal protein S2, conserved site	IPR018130	-	-
Sma3	Hemopexin/matrixin, conserved site	IPR018486	-	-
Sma3	Peroxidase, active site	IPR019794	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G21250.2	MRP6, ABCC8 multidrug resistance-associated protein 6 chr3:7457668-7463261 REVERSE LENGTH=1464	6.0e-18	75%
RefSeq	Arabidopsis thaliana	NP_001189944.1	multidrug resistance-associated protein 6 [Arabidopsis thaliana]	7.0e-18	75%
RefSeq	Populus trichocarpa	XP_002297991.1	multidrug resistance protein ABC transporter family [Populus trichocarpa]	5.0e-16	72%

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain