SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene51548

Length: 199 nt

UniGene Fasta

>sp_v3.0_unigene51548
AACTTGTCACAATGGTCCCCTGCTCACCACTAGTGCTACTGTGGATGTTCATGTTATTTGGTACGGCAGATTCAGCCCTGTTCAGCGTTCCATTGTGGCGGATTTTGTTCAGTCCTTGGAAGCCAGCAAGACCCTAGAGCCCGGGTATGTATGGAAAGGGGTCGATATCCAGGGTACCCTGGTAATCTTCTGGTTGACA

Ace file of the UniGene sp_v3.0_unigene51548

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phi_1 domain containing protein	-	-	1.0e-12	39%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	79%

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphate-induced protein 1	IPR006766	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LNQ3

Fln msg: Distance to subject end: 211 aas, your sequence is shorter than subject: 66 - 307

Fln protein: TCHNGPLLTTSATVDVHVIWYGRFSPVQRSIVADFVQSLEASKTLEPGYVWKGVDIQGTLVIFWLT

Protein Length: 67

Fln nts: AACTTGTCACAATGGTCCCCTGCTCACCACTAGTGCTACTGTGGATGTTCATGTTATTTGGTACGGCAGATTCAGCCCTGTTCAGCGTTCCATTGTGGCGGATTTTGTTCAGTCCTTGGAAGCCAGCAAGACCCTAGAGCCCGGGTATGTATGGAAAGGGGTCGATATCCAGGGTACCCTGGTAATCTTCTGGTTGACA

Fln Alignment:

F51TW9001CZDWC___TCHNGPLLTTSATVDVHVIWYGRFSPVQRSIVADFVQSLEASKTLEPG-YVWK
B8LNQ3_______________TYHNGPLLTTRPAVDVHVIWYGRFSPAQRSIVADFVQSLEASKATEPSVYSWR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain