SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene51276

Length: 573 nt

UniGene Fasta

>sp_v3.0_unigene51276
CCAGCAGTCTACCCGGGCACCAGCGCCAACAGCAGCGACCAGTCTGATCTACTGGAATGGCTGGACCGGCAGAGGGCGGCCTCGGTCGTCTTTGTGTCGTTCGGCAGCGAGGTATTTCTGTCAGAACACCAAATCCACGAGCTGGCCCTGGGATTAGAGGCGACCGGACTCCCGTTCCTCTGGTGTCTTCGTTTTCCAAGGTATTCTGACCGTGGCCGCGACGATTCGCTGAGGATCCTACCGGAGGGATTTCAGAATCGAACCCAGGACTGGGGGCTCGTCGTCGAGGGCTGGGTACCGCAGGTACGGATCCTGTCGCATCCATCGATCGGTGGGTTTTTGAGCCACTCAGGATGGAGCTCTGTCATGGAGTCGCTGAGCTTTGGAATTCCTCTTATCTTGCTCCCTATTCAAGCTGACCAAGGGTTGAACGCCCGGCAAGTGGCCGCGGAATTGAAGGCAGGGATCGAAATAGAAAGGGGAGAAGATGGCTCTTTTCTGAGAGAAAACGTATCTACTACATTAACAATGGCAATGTTAGGAAAGGAGGGGCAAAATTTGAGGTCGAAAGCA

Ace file of the UniGene sp_v3.0_unigene51276

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative anthocyanidine rhamnosyl-transferase [Capsicum annuum]	-	-	4.0e-34	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Sma3	Putative UDP-glucosyltransferase	-	-	6.152e-19	-

Source	ECs	Term	Type	e value	Identity
Sma3	Anthocyanidin 3-O-glucosyltransferase.	EC:2.4.1.115	-	1.858e-22	-

Source	KEGGs	Term	e value	Identity
Sma3	Anthocyanin biosynthesis	00942	1.858e-22	%
Sma3	Metabolic pathways	01100	1.858e-22	%
Sma3	Biosynthesis of secondary metabolites	01110	1.858e-22	%

Source	Gene names
Sma3	At2g18570; At2g22590; GSVIVT00001695001; GSVIVT00002450001; GSVIVT00011804001; GSVIVT00011805001; GSVIVT00011806001; GSVIVT00011808001; GSVIVT00011809001; GSVIVT00011811001; GSVIVT00022072001; GSVIVT00026921001; GSVIVT00026922001; GSVIVT00026923001; GSVIV

Source	GOs	Term	Type	Identity
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	-
Sma3	anthocyanidin 3-O-glucosyltransferase activity	GO:0047213	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	-
Sma3	NADH:flavin oxidoreductase/NADH oxidase, N-terminal	IPR001155	-	-
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	-
Sma3	Glycosyl transferase, family 28	IPR004276	-	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002320817.1	predicted protein [Populus trichocarpa]	0.0	53%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKI0

Fln msg: Distance to subject end: 36 aas, your sequence is shorter than subject: 191 - 476

Fln protein: PAVYPGTSANSSDQSDLLEWLDRQRAASVVFVSFGSEVFLSEHQIHELALGLEATGLPFLWCLRFPRYSDRGRDDSLRILPEGFQNRTQDWGLVVEGWVPQVRILSHPSIGGFLSHSGWSSVMESLSFGIPLILLPIQADQGLNARQVAAELKAGIEIERGEDGSFLRENVSTTLTMAMLGKEGQNLRSKA

Protein Length: 192

Fln nts: CCAGCAGTCTACCCGGGCACCAGCGCCAACAGCAGCGACCAGTCTGATCTACTGGAATGGCTGGACCGGCAGAGGGCGGCCTCGGTCGTCTTTGTGTCGTTCGGCAGCGAGGTATTTCTGTCAGAACACCAAATCCACGAGCTGGCCCTGGGATTAGAGGCGACCGGACTCCCGTTCCTCTGGTGTCTTCGTTTTCCAAGGTATTCTGACCGTGGCCGCGACGATTCGCTGAGGATCCTACCGGAGGGATTTCAGAATCGAACCCAGGACTGGGGGCTCGTCGTCGAGGGCTGGGTACCGCAGGTACGGATCCTGTCGCATCCATCGATCGGTGGGTTTTTGAGCCACTCAGGATGGAGCTCTGTCATGGAGTCGCTGAGCTTTGGAATTCCTCTTATCTTGCTCCCTATTCAAGCTGACCAAGGGTTGAACGCCCGGCAAGTGGCCGCGGAATTGAAGGCAGGGATCGAAATAGAAAGGGGAGAAGATGGCTCTTTTCTGAGAGAAAACGTATCTACTACATTAACAATGGCAATGTTAGGAAAGGAGGGGCAAAATTTGAGGTCGAAAGCA

Fln Alignment:

EPDB_BX678334___PAVYPGTSANSSDQSDLLEWLDRQRAAXXXXXXXXXXXXXXEHQIHELALGLEATGLPFLWCLRFPRYSDRGRDDSLRILPEGFQNRTQDWGLVVEGWVPQVRILSHPSIGGFLSHSGWSSVMESLSFGIPLILLPIQADQGLNARQVAAELKAGIEIERGEDGSFLRENVSTTLTMAMLGKEGQNLRSKA
B8LKI0_______________PAVLPGASGNGSDHSDLLEWLDRQREASVVFVSFGSEAFLSEDQIHELALGLEASGLPFLWSIRFPRYSDGGHDP-LGVFPEGFQIRTQDRGLVVEGWVPQVQILSHRSIGGFLSHGGWSSAMESLSFGIPLIVLPIQLDQGLNARQIAAELKAGIEIERGEDGSFLRENICTTLTMAMAGEEGEKLRSKA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain