SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene50895

Length: 196 nt

UniGene Fasta

>sp_v3.0_unigene50895
ACGTGGGATGTCAAAGTGTAGGCTCAAGAATTGTCAAGACTCCTTATCGGAAAAGGTCTCCTCTAAATTGGTTTCCACGGAAGAAAACAGAATCTTATCTTGAGCGGAAGATCAAAATGTTGCAGGAAGCAGAGGGAATGATGGCATCTCTCGATGAGACTCTGGTTTGTTCAAATATTCATTTGCCGAGAGTTGA

Ace file of the UniGene sp_v3.0_unigene50895

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	66%
Sma3	Os03g0604600 protein	-	-	9.747e-06	-

Source	Gene names
Sma3	GSVIVT00001441001; LOC_Os03g40780; OSJNBa0004G03.15; Os03g0604600; OsI_12549; OsJ_11682; PHYPADRAFT_71697; POPTRDRAFT_549981; POPTRDRAFT_722377; RCOM_0174720;

Source	InterPros	Term	Type	e value	Identity
Sma3	DNA methylase, C-5 cytosine-specific, active site	IPR018117	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G49870.1	" unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 6518 Blast hits to 5022 proteins in 522	1.0e-12	54%
RefSeq	Arabidopsis thaliana	NP_001117458.1	uncharacterized protein [Arabidopsis thaliana]	2.0e-12	54%
RefSeq	Populus trichocarpa	XP_002298764.1	predicted protein [Populus trichocarpa]	1.0e-16	63%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9SNB8

Fln msg: Distance to subject end: 781 aas, your sequence is shorter than subject: 64 - 902

Fln protein: VGCQSVGSRIVKTPYRKRSPLNWFPRKKTESYLERKIKMLQEAEGMMASLDETLVCSNIHLPRV

Protein Length: 65

Fln nts: ACGTGGGATGTCAAAGTGTAGGCTCAAGAATTGTCAAGACTCCTTATCGGAAAAGGTCTCCTCTAAATTGGTTTCCACGGAAGAAAACAGAATCTTATCTTGAGCGGAAGATCAAAATGTTGCAGGAAGCAGAGGGAATGATGGCATCTCTCGATGAGACTCTGGTTTGTTCAAATATTCATTTGCCGAGAGTTGA

Fln Alignment:

CL18524Contig1___SRIVKTPYRKRSPLNWFPRKKTESYLERKIKMLQEAEGMMASLDETLVCSNIHLPRV
B9SNB8_______________SQIKKPPHRKNSPINWFPRKKVDSYLKRKIKMLQEIDGMNLTLDETLGDSNPHYSRV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain