SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene50325

Length: 143 nt

UniGene Fasta

>sp_v3.0_unigene50325
TGAAGATATGATGCATTATCTACGCAAAAATTTGGCGCTTTTCCCATATCACTTAGCCGAATATGTATGTCGAATAATGAGAATATCACCTTTCAGATACTACTGTGACATGCTTTACGAAGTTATGAAAAATGAGCAACCAT

Ace file of the UniGene sp_v3.0_unigene50325

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	89%

Source	Gene names
Sma3	At1g35220; B1146F03.33; GSVIVT00015178001; Os01g0303200; Os05g0355100; OsI_01557; OsI_19596; OsJ_01450; OsJ_18194; PHYPADRAFT_160334; PHYPADRAFT_161177; POPTRDRAFT_551612; RCOM_1037490; T32G9.24; T9I1.1;

Source	GOs	Term	Type	e value	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Leghaemoglobin	IPR001032	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G35220.1	" unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in 75	3.0e-25	89%
RefSeq	Arabidopsis thaliana	NP_174756.2	uncharacterized protein [Arabidopsis thaliana]	3.0e-25	89%
RefSeq	Populus trichocarpa	XP_002301074.1	predicted protein [Populus trichocarpa]	6.0e-25	85%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RJQ7

Fln msg: Distance to subject end: 886 aas, your sequence is shorter than subject: 47 - 1003

Fln protein: EDMMHYLRKNLALFPYHLAEYVCRIMRISPFRYYCDMLYEVMKNEQP

Protein Length: 48

Fln nts: TGAAGATATGATGCATTATCTACGCAAAAATTTGGCGCTTTTCCCATATCACTTAGCCGAATATGTATGTCGAATAATGAGAATATCACCTTTCAGATACTACTGTGACATGCTTTACGAAGTTATGAAAAATGAGCAACCAT

Fln Alignment:

CL12314Contig1___EDMMHYLRKNLALFPYHLAEYVCRIMRISPFRYYCDMLYEVMKNEQP
B9RJQ7_______________EDMMRYLRKNLALFPYHLAEYVCRVMRVSPFRYYCDMIFEVMKNEQP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain