SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene49587

Length: 1678 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene49587 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SCH3_RICCO	-	-	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	77%
Sma3	Putative uncharacterized protein	-	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: C0PPT9

Fln msg:

Fln protein: MARNPESLHALLFPYPAQGHINPMMHLAKKLASKGVTVTFVNTHHRHQQITKANNHSAEQDDPLDKEALDAGLDIRSVQISDGLPLDFDRSGRLIDFMRSVDNMAGELERLLQNLNKTGPAISCVIADSSLPWSFEVTKKLGIPWILFWTQPTFLYSIHYHAHLLEDLRCNLYEGTADEGSISIDFIPGVPNLEARDLPSFVRQSDPESQAILDLVHRSLQACREADWILGNSFDHLERKEVNFNPPVLHVGPLLPSGFLNSEHSEDMRVGTSIWTESDCSKWLDAKSNRSVLYVSFGSMVFVTKAQLEEIAMGLKDSGQLFLWALRPDIVSSTVSDCLPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPMIGFPFWADQFTNSKLMADEWKIGYRLSCGKGLILRKEISRTVRKLFSDEGTEVKKNVEALRDSARTAVRRGGSSDINIESFLEGLKGNRIRK*

Protein Length: 484

Fln nts: GAGTCCGGTGTGAGTTAATTAGTCAGTAGGCGAGGAACGTTGAAGCTCACAATCGATCGAACAATCCA_-_ATGGCTCGCAATCCGGAATCCTTGCATGCCCTCCTGTTTCCATACCCAGCGCAAGGTCACATAAATCCCATGATGCACTTGGCGAAGAAACTTGCTTCCAAAGGTGTTACAGTCACGTTCGTTAACACGCACCACAGGCACCAGCAGATCACTAAGGCTAACAATCACAGTGCTGAACAAGACGACCCTCTTGATAAGGAAGCGCTTGATGCTGGTCTTGATATTCGCTCTGTTCAAATCTCTGATGGATTACCTCTGGATTTCGATCGGTCAGGCAGATTGATCGATTTTATGCGCTCTGTAGATAATATGGCAGGAGAGTTGGAACGACTCCTTCAAAATCTCAACAAGACAGGGCCGGCAATTTCTTGTGTCATAGCTGATAGTTCACTTCCCTGGTCATTTGAAGTCACAAAGAAATTAGGTATTCCCTGGATTTTGTTTTGGACACAGCCTACCTTTCTTTATTCGATCCACTATCACGCACATCTGCTGGAGGATCTCCGTTGCAATCTTTATGAAGGAACCGCTGATGAGGGCAGCATTTCGATTGATTTTATTCCGGGCGTACCAAACTTAGAAGCACGAGATCTTCCGTCATTCGTACGTCAGTCGGACCCCGAGTCGCAGGCCATTCTTGATCTGGTTCATAGGTCCTTACAGGCATGTCGCGAAGCAGATTGGATTCTTGGCAATTCTTTTGACCATCTCGAAAGAAAAGAGGTGAATTTCAACCCTCCGGTACTGCATGTTGGTCCGTTGCTTCCCTCCGGTTTTTTAAACAGTGAACATTCCGAGGACATGAGAGTTGGAACGAGCATTTGGACAGAATCTGACTGTTCCAAGTGGCTGGATGCAAAGTCTAATCGTTCGGTTCTATACGTTTCCTTTGGGAGTATGGTTTTTGTCACTAAAGCTCAGCTGGAGGAAATAGCGATGGGTTTGAAGGACAGCGGGCAGTTGTTCCTCTGGGCTCTTCGTCCGGACATAGTCTCTTCAACAGTCTCAGACTGCTTACCCCATGGTTTTCTGGATGAGATAAAAGGGCAGGGGCTTGTTGTTCCATGGTGCAATCAGCTGCAAGTGTTATCCCATCCGTCCGTTGCGGGATTCGTTACTCATTGCGGATGGAACTCAATGCTTGAAAGCATAGCTGGTGGAGTTCCCATGATAGGTTTTCCATTTTGGGCGGATCAATTCACCAACAGCAAGCTCATGGCCGATGAATGGAAAATTGGATACAGATTGAGCTGTGGGAAAGGGCTGATACTAAGGAAAGAGATATCCAGAACTGTCAGAAAATTGTTCAGTGACGAAGGGACGGAGGTAAAGAAAAATGTCGAGGCTCTAAGAGACAGTGCGAGGACTGCGGTGCGAAGAGGAGGATCTTCGGATATAAACATTGAGAGCTTCCTAGAAGGTTTGAAGGGGAACCGTATCCGTAAATAA___CTGCATGATAGTGAACCATCTCACACATGTTTTATCACTCGTATGACGCATGATGTTTCACACATGTTTATCACTCGTATGACGCATGATGTTTTACCTGAGTTTATAAATGTTTTAGTTGAATTTATAAATATTTTAGCTGGGTTTATAAATGTTTTAGC

Fln Alignment:

CL456Contig1___MARNPESLHALLFPYPAQGHINPMMHLAKKLASKGVTVTFVNTHHRHQQITKANNHSAEQDDPLDKEALDAGLDIRSVQISDGLPLDFDRSGRLIDFMRSVDNMAGELERLLQNLNKTGPAISCVIADSSLPWSFEVTKKLGIPWILFWTQPTFLYSIHYHAHLLEDLRCNLYEGTADEGSISIDFIPGVPNLEARDLPSFVRQSDPESQAILDLVHRSLQACREADWILGNSFDHLERKEVNFNPPVLHVGPLLPSGFLNSEHSEDMRVGTSIWTESDCSKWLDAKSNRSVLYVSFGSMVFVTKAQLEEIAMGLKDSGQLFLWALRPDIVSSTVSDCLPHGFLDEIKGQGLVVPWCNQLQVLSHPSVAGFVTHCGWNSMLESIAGGVPMIGFPFWADQFTNSKLMADEWKIGYRLSCG-----KGLILRKEISRTVRKLFSDEGTEVKKNVEALRDSARTAVRRGGSSDINIESFLEGLKGNRIRK
C0PPT9_______________MARNPEHLHALVFPYPTQGHITPMMQFAKKLASKGVIVTFLTTHHRHQQITKAHTLSAEQDDPIEQEARKLGLDISSAQISDGLPLDFDRSARFNDFMRSVDNMGGELEQLLHNLNKTGPAVSCVIADTILPWSFEIAKKLGIPWISFWTQPTVLYSIYYHAHLLEDLHHSLCEGTADEGSISIDYIPGVPTLKTRDLPSFIREGDADSKYILNVLRKSFQLSREADWVLGNSFDDLESKSVHLKPPVLQVGPLLPSSFLNSEHSKDIGVGTSIWTQYDASEWLDAKPNGSVIYVSFGSLIHATKAQLEEIAMGLKDSGQFFLWVLRPDIVSSTVSDCLPDGFLDEIKMQGLVVPWCNQLQVLSHPSVAGFITHCGWNSMLESIALAVPMIGFPFWADQFTNCKLMADEWKIGYRFSGGGQAGDKGLIVRKDISSAIRQLFSEEGTEVKKNVEGLRDSARAAVREGGSSDKNIERFVEGLKGRGISK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain