SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene49374

Length: 345 nt

UniGene Fasta

>sp_v3.0_unigene49374
AGAGGCCTAATGTTGTACAAGCACTACTAGAAGGGTTGTCATTGAGTCAGCCTCAGCCTAAAATACCAAGTGAGCTTATCAAGTTTCTGGGGAAAACTTATAATGCATGGCATATAGCTGTTTCTTTATTGGAAAGCCATGTAATGCTATTTCCTCAGGAAACACGCTGCTCTGAGGCCCTTGCTGAACTGTATCGTATGCTTAATGAGGAAGATGTACGCTATGGATTATGGAAAAAAAGGCCAATAACTGCAGAAACAAGGGCAGGACTTTCCTTGGTTCAGCATGGATACTGGCAGCGTGCTCAAGATCTTTTTTATCAGGCAATGAGTAAAGCAACCCAAG

Ace file of the UniGene sp_v3.0_unigene49374

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[TDBLU] COG5032 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family	-	-	3.0e-16	39%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	90%

Source	Gene names
Sma3	AT4g36080; At2g17930; CHLREDRAFT_141477; GSVIVT00036786001; MICPUCDRAFT_47235; MICPUN_91134; OSTLU_42472; OsI_27084; OsJ_25347; Ot08g01230; PHYPADRAFT_183414; POPTRDRAFT_757154; POPTRDRAFT_827059; RCOM_0870970; T19K4.210; VITISV_027002;

Source	GOs	Term	Type	Identity
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	kinase activity	GO:0016301	Molecular Function	-
Sma3	phosphotransferase activity, alcohol group as acceptor	GO:0016773	Molecular Function	-

Source	InterPros	Term	Type	Identity
Sma3	Phosphatidylinositol 3-/4-kinase, catalytic domain	IPR000403	-	-
Sma3	Phosphotransferase system, HPr serine phosphorylation site	IPR002114	-	-
Sma3	PIK-related kinase, FAT	IPR003151	-	-
Sma3	PIK-related kinase, FATC	IPR003152	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	PIK-related kinase	IPR014009	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G17930.1	Phosphatidylinositol 3- and 4-kinase family protein with FAT domain chr2:7784455-7802230 REVERSE LENGTH=3858	79%
RefSeq	Arabidopsis thaliana	NP_179383.3	transformation/transcription domain-associated protein [Arabidopsis thaliana]	79%
RefSeq	Populus trichocarpa	XP_002327756.1	predicted protein [Populus trichocarpa]	83%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9SCG8

Fln msg: Distance to subject end: 1116 aas, your sequence is shorter than subject: 114 - 3825

Fln protein: RPNVVQALLEGLSLSQPQPKIPSELIKFLGKTYNAWHIAVSLLESHVMLFPQETRCSEALAELYRMLNEEDVRYGLWKKRPITAETRAGLSLVQHGYWQRAQDLFYQAMSKATQ

Protein Length: 115

Fln nts: AGAGGCCTAATGTTGTACAAGCACTACTAGAAGGGTTGTCATTGAGTCAGCCTCAGCCTAAAATACCAAGTGAGCTTATCAAGTTTCTGGGGAAAACTTATAATGCATGGCATATAGCTGTTTCTTTATTGGAAAGCCATGTAATGCTATTTCCTCAGGAAACACGCTGCTCTGAGGCCCTTGCTGAACTGTATCGTATGCTTAATGAGGAAGATGTACGCTATGGATTATGGAAAAAAAGGCCAATAACTGCAGAAACAAGGGCAGGACTTTCCTTGGTTCAGCATGGATACTGGCAGCGTGCTCAAGATCTTTTTTATCAGGCAATGAGTAAAGCAACCCAAG

Fln Alignment:

CL21087Contig1___RPNVVQALLEGLSLSQPQPKIPSELIKFLGKTYNAWHIAVSLLESHVMLFPQETRCSEALAELYRMLNEEDVRYGLWKKRPITAETRAGLSLVQHGYWQRAQDLFYQAMSKATQ
A9SCG8_______________RPNVVQALLEGLSLSQPQPKIPSELIKFLGKTYNAWHIAISLLESHVMLFPQETRCFDALAELYRMLNEEDVRYGLWKRRTITADTRAGLSLLQHGLWQRAQDVFYNAMNKATQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain