SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene49109

Length: 1493 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene49109

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	protein trichome birefringence-like 36 [Arabidopsis thaliana] gb\|AAK96825.1\| putative protein [Arabidopsis thaliana] gb\|AAM10080.1\| putative protein [Arabidopsis thaliana] gb\|AEE79205.1\| protein trichome birefringence-like 36 [Arabidopsis thaliana]	-	-	0.0	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%
Sma3	Lustrin A-like	-	-	1.426e-10	-

Source	Gene names
Sma3	At1g29050; At1g60790; At1g73140; At1g78710; At2g30010; At2g30900; At2g31120; At2g34070; At2g40150; At2g40150/T7M7.4; At2g42570; At3g12060; At3g54260; At3g55990; At3g55990/F27K19_170; At5g01360; At5g01620; At5g06700; At5g58600; At5g58600/mzn1_50; B1047G05.

Source	GOs	Term	Type	Identity
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	-
Sma3	response to fungus	GO:0009620	Biological Process	-
Sma3	response to freezing	GO:0050826	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Lipase, class 3	IPR002921	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3		IPR004253	-	-
Sma3	WRC	IPR014977	-	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002311947.1	predicted protein [Populus trichocarpa]	0.0	47%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: C0PSX7

Fln msg:

Fln protein: MASVSFRLVLSTTITCLLFLASNSIFASTVSSEEKTSSNHFQLHATTVFDGHVIDDTRDGEVAAEMVDREVDLNFNHAMHHRRVASNCDLFSGAWVHDASYPLYPAGQCPYMIEGRVNCRKNGRPDSDYEKWKWQPSHCSVPRFNAKEMLSRLRGKRLMFVGDSITRSQWESMVCMLQVAIPSNEKTLVYQSSLIIFKALGYNASVEFLWDPFLVQQSTMGGKSIIQLDSVGENGAYWKGVDVLVFESSHWWLHAEGESWEAIMKGNRLYKNLDPLLAYRKGLTTWANWISANLDPKRSLVFYRTTSPAHESSSEWNERNGHRCYNQTEPVQIVGYKPPMPPQVTIVKQVLQKTKFPVTLLDITGLTGFRKDGHPSVYSPDYNSDQRKNPDEFGDCSHWCLPGVPDTWNELLYYSLLFKGFGSG*

Protein Length: 426

Fln nts: CTGCTTAAGCAGTGGTATCAACGCAGAGTACGCGGGGCAACAAGTCACCATTAGCA_-_ATGGCCTCTGTCAGCTTTAGGCTTGTACTTAGCACTACTATTACATGCTTGCTCTTCCTTGCGAGCAACAGTATTTTTGCGTCTACTGTTTCTTCAGAAGAAAAAACAAGTAGTAACCATTTCCAACTGCACGCAACCACTGTTTTTGATGGCCATGTAATCGACGATACTCGAGATGGAGAAGTGGCTGCAGAGATGGTGGACAGAGAAGTCGACCTCAATTTCAATCATGCAATGCACCATAGAAGAGTTGCAAGTAACTGCGATCTCTTCTCTGGGGCGTGGGTCCACGATGCCTCGTATCCTCTTTATCCCGCTGGACAATGCCCTTACATGATTGAAGGAAGAGTAAACTGTAGGAAGAATGGAAGACCAGATTCTGATTACGAGAAATGGAAATGGCAGCCGAGCCACTGTTCGGTTCCCAGATTCAACGCCAAAGAAATGCTGTCGCGATTGAGGGGAAAGCGATTAATGTTTGTTGGAGACTCGATAACGCGAAGCCAGTGGGAATCCATGGTGTGCATGCTTCAAGTGGCGATTCCTAGCAATGAGAAAACTCTGGTTTATCAATCATCTCTAATAATATTCAAGGCCCTGGGTTACAACGCCTCTGTGGAGTTTTTGTGGGATCCATTTCTAGTTCAGCAGAGCACTATGGGTGGGAAGAGCATTATACAGTTGGACTCAGTTGGAGAAAATGGGGCTTACTGGAAAGGAGTCGACGTCCTGGTTTTTGAATCCTCACACTGGTGGTTGCATGCCGAAGGAGAATCATGGGAGGCTATTATGAAAGGCAATCGGCTTTACAAGAACCTGGATCCATTGTTAGCTTACAGGAAGGGGTTGACAACATGGGCAAACTGGATATCTGCAAACCTTGATCCAAAAAGATCTCTGGTCTTCTACAGAACCACGTCCCCTGCACATGAGAGTTCAAGTGAATGGAACGAGAGAAATGGGCATCGATGTTACAACCAGACGGAACCGGTGCAAATAGTAGGATACAAACCTCCAATGCCTCCTCAGGTGACCATAGTAAAGCAAGTTCTGCAGAAGACAAAGTTTCCTGTTACATTGCTGGACATTACAGGATTGACAGGGTTTCGCAAGGATGGTCACCCTTCAGTTTACAGCCCTGACTACAATTCTGACCAGAGGAAGAATCCAGATGAGTTTGGAGATTGTAGCCATTGGTGTTTACCAGGCGTACCTGATACATGGAACGAATTGTTGTACTACTCCTTGCTTTTCAAGGGTTTCGGTAGTGGATAG___CTTTTTGCGCTGATTGCAAAAAGTTCAATACTAACATATGCATGAGTCCCTGTTTTTGGGCTTGTCGACAGAATAATCTACCACGGTGAATTTTGTAACCAGTGGAGCCATTCTCTGTTTTGTTAATTGAATGGAAGTTGTTTTATAAGTTCTTGTTTTCCC

Fln Alignment:

CL17876Contig1___MASVSFRLVLSTTITCLLFLASNSIFASTVSSEEKTSSNHFQLHATTVFDGHVI--------------------DDTRDGEVAAEMVDREVDLNFNHAM----HHRRVASNCDLFSGAWVHDASYPLYPAGQCPYMIEGRVNCRKNGRPDSDYEKWKWQPSHCSVPRFNAKEMLSRLRGKRLMFVGDSITRSQWESMVCMLQVAIPSNEKTLVYQSSLIIFKALGYNASVEFLWDPFLVQQSTMG-GKSIIQLDSVGENGAYWKGVDVLVFESSHWWLHAEGESWEAIMKGNRLYKNLDPLLAYRKGLTTWANWISANLDPKRSLVFYRTTSPAHESSSEWNERNGHRCYNQTEPVQIVGYKPPMPPQVTIVKQVLQKTKFPVTLLDITGLTGFRKDGHPSVYSPDYNSDQRKNPDEFGDCSHWCLPGVPDTWNELLY
C0PSX7_______________VSSVSFILAL-TSIACLLAMENEYAYSSSEENKD------FEINTSNGIDGHLVVSPIVAEDLRRSVMEKVSSVEDTPHGEIAAEMMD-SVHLNLNHSMLNVGENKADTTKCNLFSGTWVRDASYPLFLGAQCPY-VDSKATCRQNGRPDSDYEKWRWQPSGCSIPSFNARDMLERLRGKRLMFVGDSISQSQWESMVCMLQAVIPSNKKTMISQSSLTIFKALDYSASVEFFWAPFLVQLRTDSQNKRILYLDSMESNGIYWQGIDVLVFESSHWWQH---QRWDLIMDGNKPDPNMDPMVAYKKALMTWTKWISANIDPKRSLVFFSTTSPKHYDPREWSETNVYHCYNQTGPVQFEGFRPPVPPQVLIVKEVVESMSFPVTLMDITGLSQFRKDGHPSIYSSVLSNEEKKHPEKFGDCSHWCLPGVPDTWNELLY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain