SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene49008

Length: 1807 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene49008 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Phosphofructokinase, putative n=1 Tax=Ricinus communis RepID=B9SGA6_RICCO	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	82%
Sma3	Putative uncharacterized protein	-	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G47810.1	PFK2 phosphofructokinase 2 chr5:19356569-19357989 REVERSE LENGTH=444	66%
RefSeq	Arabidopsis thaliana	NP_199592.1	6-phosphofructokinase 2 [Arabidopsis thaliana]	66%
RefSeq	Populus trichocarpa	XP_002329965.1	predicted protein [Populus trichocarpa]	63%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: C0PT73

Fln msg: your sequence is longer than subject: 468 - 426

Fln protein: MGDLAREPSIAGAQAPDSDGQKKVHGAPHLREYFQDIPSFTNPLRHNQYFRPIEGFFVTEDDMVMKNIDVDIQKMETQVLYHRAGPRSEVCFSPDEVHAAIVTCGRICPGVNTVIGELVDGLWYQYGVRDIKGIKSGYRGFYSSEPVALYPKLVSDWHKTGGTMLETSKGGFDLQKIVDGIEGCGFNQVYIIGGDGTMNGAVKIFEEVKRRRLKVSIVGIPSSVDNDVGIIDRCFGFHTATEAAQSAIDAAHVEAESATNGIGLVKLMGKNAGHIALHSTLGSRDVDCCLIPENPFYLEGEGGLFEFLENRLAENGHAVLVVAEGAGQHLIPRGPEEKEKRDEYGNPIFSDVGPWLRDELKNWWKKNHSNELFTLKYIDPTYMIRAVPANAADSIYCTLLAHSAIHGAMAGYTGFAAGMINGIYAYLPLDRVTATQKFVDINDHKWAWMMSVTNQPNFSGLPESRKI*

Protein Length: 469

Fln nts: GGTACCATCTGTGAATGACAGAATAGTTTTCAGAATTATCATCTTTGAAGTGTGTACGTATACTCTGTTTTTGTCTTTGTGACATTCTTTACTGATATCTGCA_-_ATGGGAGATCTTGCAAGGGAGCCATCAATAGCTGGAGCTCAAGCTCCTGATTCTGATGGTCAAAAGAAGGTTCATGGTGCTCCGCACTTGAGAGAATACTTCCAGGACATACCCAGTTTTACAAATCCTCTTAGGCATAACCAGTATTTTCGTCCCATTGAAGGGTTTTTTGTGACAGAGGACGATATGGTTATGAAGAACATTGATGTGGATATACAGAAAATGGAGACTCAAGTGCTCTATCACAGAGCAGGGCCCCGGTCTGAGGTATGTTTTAGTCCTGATGAAGTCCATGCTGCCATTGTTACATGTGGGAGGATTTGTCCCGGTGTTAACACGGTCATAGGAGAGCTAGTAGATGGTCTCTGGTACCAGTATGGAGTAAGGGATATCAAAGGGATTAAGTCTGGTTATCGTGGGTTTTACTCATCAGAGCCTGTGGCTTTGTATCCCAAGTTGGTGAGTGATTGGCACAAAACAGGGGGGACAATGCTGGAGACCTCCAAGGGGGGCTTTGATTTGCAGAAGATAGTGGATGGGATTGAGGGCTGTGGGTTTAACCAGGTGTATATCATTGGTGGAGATGGGACTATGAATGGTGCAGTGAAGATATTTGAAGAAGTCAAGAGGAGGAGGCTCAAGGTTTCCATTGTTGGGATCCCAAGTTCTGTGGATAATGATGTGGGGATCATTGATAGATGCTTTGGTTTTCATACAGCAACAGAGGCAGCTCAGAGTGCTATTGATGCAGCCCATGTTGAGGCCGAGAGTGCCACTAATGGAATAGGGCTGGTTAAGTTGATGGGTAAGAATGCTGGACACATTGCACTGCATTCAACTTTGGGTAGTAGGGATGTGGACTGCTGCCTTATACCTGAGAACCCATTTTATCTGGAAGGAGAAGGGGGGTTATTTGAGTTTTTAGAGAATAGGTTGGCTGAGAATGGACATGCTGTGCTTGTTGTTGCAGAGGGTGCTGGACAGCATTTGATTCCCAGGGGGCCTGAGGAGAAGGAAAAGAGGGATGAATATGGGAATCCTATTTTTTCAGATGTTGGGCCATGGCTCAGAGATGAGCTGAAGAATTGGTGGAAGAAAAATCACTCCAATGAGCTCTTTACACTGAAGTATATTGATCCAACTTATATGATCAGAGCAGTCCCTGCTAATGCTGCTGATAGTATCTACTGCACTCTGCTTGCTCACTCTGCCATCCATGGAGCCATGGCTGGCTATACAGGTTTTGCTGCAGGAATGATAAATGGGATCTATGCCTACCTTCCATTGGATCGGGTGACTGCCACTCAGAAATTTGTGGATATAAATGATCATAAGTGGGCTTGGATGATGTCTGTAACGAACCAGCCAAACTTTTCTGGTCTTCCAGAATCTAGAAAGATCTAG___AAAGGAGGGATGTTTCTCAGCATTGTTTGGCAGGTCTGGTGCATGCCATTTTAATTTACAGCTATAAATCTTACAGTTCAATATTTCAGCGCAGAGGCTACTAGCTATTTTATCTCTCTGTTTCTCCTCTAATTTATGTTTTTTAAGGCAGTACAGCTGGACATCAAACCTGCTGGCACTCTTTTGCATTATTTATAAATAAAGTTGCCCCTGATTTTTGTGGGAAGCTGTACGTTTCAGCTATTCCATATATTTGTATGTATATTTTTGATGTGTAATAAAGTGCAGCGCTTTAAAATT

Fln Alignment:

CL16879Contig1___HNQYFRPIEGFFVTEDDMVMKNIDVDIQ--KMETQVLYHRAGPRSEVCFSPDEVHAAIVTCGRICPGVNTVIGELVDGLWYQYGVRDIKGIKSGYRGFYSSEPVALYPKLVSDWHKTGGTMLETSKGGFDLQKIVDGIEGCGFNQVYIIGGDGTMNGAVKIFEEVKRRRLKVSIVGIPSSVDNDVGIIDRCFGFHTATEAAQSAIDAAHVEAESATNGIGLVKLMGKNAGHIALHSTLGSRDVDCCLIPENPXXXXXXXXXXXXXENRLAENGHAVLVVAEGAGQHLIPRGPEEKEKRDEYGNPIFSDVGPWLRDELKNWWKKNHSNELFTLKYIDPTYMIRAVPANAADSIYCTLLAHSAIHGAMAGYTGFAAGMINGIYAYLPLDRVTATQKFVDINDHKWAWMMSVTNQPNFSGLPESRK
C0PT73_______________YSDYFHPLEGFFVSENDMVMENIVVDIQTIKRETQVLYHRAGPRSEVCFNPDDVRAAIVTCGRLSPGVNTVVRELVIGLWSQCGVRDIRGIRSGYRGFYSSDPVALTPKLVDNWHRTGGTVLETSRGGFDLQKIVDGIEANGFNQVYIIGGDGTMKGAVKVFEEVKRRRLKVSIVGIPNSVDNDVGVIDRSFGFHTAVETAQSAINAAHVEAESAPNGVGLVRLMGRTTGHIALNSTLGSRDVDCCLIPENPFYLEGEGGLFEFLEHRLAENGHFVLVVAEGAGQELIPRRPEDKDKRDEYGNPVFLDVGPWLRDELKNWWKKHHPNEQFTLKYIDPTYMIRAVPGNAADNIYCTLLAHSAIHGVMAGYTGFAAGMINGVYAYIPLDRVAATQNFVDVNDHKWAWMTSVTNQPDFSCLAKSIK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain