UniGene Name: sp_v3.0_unigene48803
Length: 185 nt
This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense
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>sp_v3.0_unigene48803
T |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Os01g0689900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5N7Q8_ORYSJ | - | - | 2.0e-24 | 85% |
FL-Next | tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). | - | - | 0.0 | 59% |
Sma3 | Wall-associated kinase, putative | - | - | 1.723e-18 | - |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Non-specific protein-tyrosine kinase. | EC:2.7.10.2 | - | 1.582e-09 | - |
Sma3 | Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases. | EC:2.7.11.- | - | 1.966e-13 | - |
Sma3 | EC:2.7.11.3- | - | 7.767e-07 | - |
Source | Gene names |
---|---|
Sma3 | AT2G28960; AT2G28970; AT3G21340; AT4g29180; AT5G16900; AT5G59650; AT5G59680; At1g16150; At1g18390; At1g21210; At1g21230; At1g25390; At1g51830; At1g66880; At2g23450; At2g28960; At2g28970; At2g29000; At3g46290; At3g53840; At5g02070; At5g38210; At5g54380; At |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | plasma membrane | GO:0005886 | Cellular Component | 0.0 | - |
Sma3 | plant-type cell wall | GO:0009505 | Cellular Component | 0.0 | - |
Sma3 | cell surface | GO:0009986 | Cellular Component | 0.0 | - |
Sma3 | integral to membrane | GO:0016021 | Cellular Component | 0.0 | - |
Sma3 | proton-transporting ATP synthase complex, catalytic core F(1) | GO:0045261 | Cellular Component | 0.0 | - |
Sma3 | nucleic acid binding | GO:0003676 | Molecular Function | 0.0 | - |
Sma3 | peptidyl-prolyl cis-trans isomerase activity | GO:0003755 | Molecular Function | 0.0 | - |
Sma3 | protein kinase activity | GO:0004672 | Molecular Function | 0.0 | - |
Sma3 | protein serine/threonine kinase activity | GO:0004674 | Molecular Function | 0.0 | - |
Sma3 | protein tyrosine kinase activity | GO:0004713 | Molecular Function | 0.0 | - |
Sma3 | receptor activity | GO:0004872 | Molecular Function | 0.0 | - |
Sma3 | calcium ion binding | GO:0005509 | Molecular Function | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | hydrogen ion transporting ATP synthase activity, rotational mechanism | GO:0046933 | Molecular Function | 0.0 | - |
Sma3 | proton-transporting ATPase activity, rotational mechanism | GO:0046961 | Molecular Function | 0.0 | - |
Sma3 | protein folding | GO:0006457 | Biological Process | 0.0 | - |
Sma3 | protein phosphorylation | GO:0006468 | Biological Process | 0.0 | - |
Sma3 | unidimensional cell growth | GO:0009826 | Biological Process | 0.0 | - |
Sma3 | response to zinc ion | GO:0010043 | Biological Process | 0.0 | - |
Sma3 | response to nickel cation | GO:0010045 | Biological Process | 0.0 | - |
Sma3 | ATP synthesis coupled proton transport | GO:0015986 | Biological Process | 0.0 | - |
Sma3 | cell wall macromolecule catabolic process | GO:0016998 | Biological Process | 0.0 | - |
Sma3 | response to cadmium ion | GO:0046686 | Biological Process | 0.0 | - |
Sma3 | protein autophosphorylation | GO:0046777 | Biological Process | 0.0 | - |
Sma3 | lateral root development | GO:0048527 | Biological Process | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT1G25390.1 | Protein kinase superfamily protein chr1:8906640-8908800 REVERSE LENGTH=629 | 4.0e-29 | 81% |
RefSeq | Arabidopsis thaliana | NP_173910.1 | protein kinase-like protein [Arabidopsis thaliana] | 5.0e-29 | 81% |
RefSeq | Populus trichocarpa | XP_002337962.1 | predicted protein, partial [Populus trichocarpa] | 3.0e-31 | 81% |
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Fln status: Internal
Fln database: coniferopsida.fasta
Fln subject: B8LPC1
Fln msg: Distance to subject end: 128 aas, your sequence is shorter than subject: 61 - 611
Fln protein:
D
Protein Length:
62
Fln nts:
T
Fln Alignment:
CL14703Contig1___DEELHVKVADFGLSRFVPLDVTHVSTAPQGTPGYVDPEYHHCYRLTDKSDVYSFGVVLMEI
B8LPC1_______________DENFNARVADFGLAKFAPEGVSHLSTRVAGTLGYVAPEYALYGQLTEKSDVYSFGVVLLEL
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain