SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene47958

Length: 644 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene47958 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	molecular chaperone HscB [Arabidopsis thaliana] gb\|AAM91610.1\| putative protein [Arabidopsis thaliana] gb\|AAN15384.1\| putative protein [Arabidopsis thaliana] gb\|AED91011.1\| molecular chaperone HscB [Arabidopsis thaliana]	-	-	0.0	50%
FL-Next	tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley).	-	-	0.0	57%

Source	Gene names
Sma3	At5g06410; GSVIVT00027167001; LOC_Os12g27070; Os12g0456200; OsI_38245; OsJ_36006; PHYPADRAFT_199578; POPTRDRAFT_291932; RCOM_0422040;

Source	GOs	Term	Type	Identity
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	heat shock protein binding	GO:0031072	Molecular Function	-
Sma3	chaperone binding	GO:0051087	Molecular Function	-
Sma3	protein folding	GO:0006457	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Glycoside hydrolase, chitinase active site	IPR001579	-	-
Sma3	Heat shock protein DnaJ, N-terminal	IPR001623	-	-
Sma3	Co-chaperone Hsc20	IPR004640	-	-
Sma3	Heat shock cognate protein B, C-terminal oligomerisation	IPR009073	-	-
Sma3		IPR015609	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G06410.1	DNAJ heat shock N-terminal domain-containing protein chr5:1959719-1961132 REVERSE LENGTH=252	50%
RefSeq	Arabidopsis thaliana	NP_196259.2	molecular chaperone HscB [Arabidopsis thaliana]	50%
RefSeq	Populus trichocarpa	XP_002333468.1	predicted protein, partial [Populus trichocarpa]	52%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain