SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene47728

Length: 2171 nt

UniGene Fasta

>sp_v3.0_unigene47728
AGTCAATTTTTGCAGAACTTAAAACCTACGTGAATATACCCGGAGAACAAACAGGGGCTCTGGGAAACACTGGTGAGAAAAAATGAGAATGGGTTGGGGGAACAAGAAGAATCCTATGGTGTCCAATGAAGATCCGAAGCTTCCGGTTGGCAAATATGAACTGGTTAACAGCAATGGCATCCAAAGCAATTCTATTCCAAGTTCCCCTGTGAAGAAGTCTATGAACAAGTATGTCATTGCCTGTGCAGTTTTGGCATCAATGAACTCCATTATTCTTGGATACGATGGTGGTGTTATGAGTGGAGCAATTATATTTATTCAAGAGGATCTGGTTATAACAGAAGTACAAGAAGAGGTACTTGTTGGGTCGTTGAATATAATCTCTCTTGCGGGAGCAGCCATTGCAGGCAGGACCTCAGATGCAATAGGAAGAAGATGGACAATGGCTTTGGCAGCACTGATATTCCTGATGGGTGCAGCTGTAATGGGTTTGGCTCCTTCCTTTCCTCTGTTGATGGGAGGCAGGCTTTTAGCTGGGGTTGGTGTTGGGTTTGCTCTAATGATTGCCCCAGTCTATACTGCTGAGCTGGCCCCTGCATCCGGCCGAGGGGCACTCACATCACTTCCTGAAATCTTTATCAATGCAGGGATTCTTTTGGGGTACATCTCCAATTATTTTCTGTCAGGGCTTCCTGCTCATCTGAGCTGGAGATTGATGCTTGGTTTGGGGGTTTTTCCATCATTATTACTTGGATTAGGTGTCCTTGCCATGCCCGAATCCCCTAGATGGCTTGTTATGCAAAACAGGATCCCAGAAGCCATGGTCGTACTTTCAAGGACCTCGGATGATCAAGCCGAGGCTGATGCAAGATTGGCTCAAATTATGGATGCAGCAGGAGTTCAGGGAAATGATGATGCCCATCAATCAGGTGGGCATGAGGGAACTTCTTTAGACATATCCAATTCCCCTGATGCCCAAAAGAGTCATGGGGAAGGAGTCTGGCTTGAGCTCCTGAGGCCCACTCCCCTGGTCCGAAGACTGCTTATCATAGCCTTAGGGATTCAATTCTTCCAGCAAGCATCAGGCATTGATGCAACAGTCTATTACAGTCCAGTGGTTTTCAAAGAAGCTGGAATTCATAGCCAAGAAGGGATTCTTGCTGCCACCGTTGCAGTGGGCTTTGCAAAGACTGGATTTATCCTGGTGGCCACATTTTTGCTAGATCGTGTTGGGCGGAGACTATTGTTGCTTACCAGTGCCCTTGGAATGACTGTATCTTTGATGGCATTGGCAATGGGATTTGACTTCATAGAAAACACATCTGAAACCAATAAGGGAGCTGTGATTCTGGCTATATTGGCCGTGTGCTGCAATGTTGCTTTCTTCTCCATCGGATTAGGGCCGGTATGCTGGGTGTTAGGGTCTGAGATTTTCCCATTGAGGCTCCGAGCACAGGCAGTCAGTTTGGGTGTAATAGTAAACAGGATTGTTAGTGGGACAGTGGCAATGACTTTCTTGAGTGTTTCTAGGGCAATTACTGTGTCAGGTACATTTTCCCTTTTTGCTTGTCTATCAGTGCTCTGTGTAGCCTTCATATATATCTTTGTGCCCGAGACAAAGGGCAAAACTCTGGAAGAGATTGTGGCATTTTTTGATGAGGAAGAGGCAAAGAGACTGTCACAAGGCGCCGAGTTGGAGCTTGGGGACACAACATCTCTTGTCCAGAAAAACTGACTTCTCATACAATTACTGCTTGGATGGAATTTATTTGACTTCCTAAAACAAACATTGAAAAAATCATAATGGCCTTCGACATCAGAATATCTATTTTAGAAACACGGAGGATCAGAGATGGAGTTGAAACACCTGATGATTGTAATTCCAAAGCTATGTGTACAGTACATGTTCGATTAGCTTTTGCAGAAGGTCAGAACAGACAGACTAATGCATTTTTACCATATGTTTCCCCTCTGATTTGTGCTGTCATTTTTAAACTCAGTTCTGCAGTATCTCAAGCTTCTCTCCCATGATAGTCAATGCCTATTATACCTGCAAAGTTCTAGCTGGAGAAAGACTCAGTGCTATATGTCATGATCTGGCTTGTGTCGCTGTATGTGTTTCCTTTATGGACCTTCGGTATTGCATCTGTCCTTGATGTTTCTATTGTGGC

Ace file of the UniGene sp_v3.0_unigene47728

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	General substrate transporter [Medicago truncatula]	-	-	0.0	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	64%
Sma3	Mannitol transporter	-	-	9.624e-24	-

Source	ECs	Term	Type	e value	Identity
Sma3	2-alkenal reductase.	EC:1.3.1.74	-	1.227e-08	-

Source	Gene names
Sma3	AP22.86; At2g16120; At2g16130; At2g18480; At2g20780; At3g18830; At4g36670; BvcDNA-205; BvcDNA-397; C7A10.690; F24H14.17; F5H14.25; F7H1.14; F7H1.15; GSVIVT00010278001; GSVIVT00016743001; GSVIVT00024964001; GSVIVT00025836001; GSVIVT00036419001; H0801D08.10

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	sugar:hydrogen symporter activity	GO:0005351	Molecular Function	-
Sma3	galactose transmembrane transporter activity	GO:0005354	Molecular Function	-
Sma3	glucose transmembrane transporter activity	GO:0005355	Molecular Function	-
Sma3	myo-inositol transmembrane transporter activity	GO:0005365	Molecular Function	-
Sma3	D-xylose transmembrane transporter activity	GO:0015148	Molecular Function	-
Sma3	glycerol transmembrane transporter activity	GO:0015168	Molecular Function	-
Sma3	mannitol transmembrane transporter activity	GO:0015575	Molecular Function	-
Sma3	sorbitol transmembrane transporter activity	GO:0015576	Molecular Function	-
Sma3	D-ribose transmembrane transporter activity	GO:0015591	Molecular Function	-
Sma3	substrate-specific transmembrane transporter activity	GO:0022891	Molecular Function	-
Sma3	carbohydrate transport	GO:0008643	Biological Process	-
Sma3	transmembrane transport	GO:0055085	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Sugar/inositol transporter	IPR003663	-	-
Sma3	Protein of unknown function DUF247, plant	IPR004158	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Endoplasmic reticulum, stress-associated Ramp4	IPR010580	-	-
Sma3	Protein of unknown function DUF1195	IPR010608	-	-
Sma3	DNA methylase, C-5 cytosine-specific, active site	IPR018117	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G20780.1	Major facilitator superfamily protein chr2:8947496-8949170 REVERSE LENGTH=526	53%
RefSeq	Arabidopsis thaliana	NP_179671.2	putative polyol transporter 4 [Arabidopsis thaliana]	53%
RefSeq	Populus trichocarpa	XP_002305016.1	predicted protein [Populus trichocarpa]	58%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LLD6

Fln msg:

Fln protein: MRMGWGNKKNPMVSNEDPKLPVGKYELVNSNGIQSNSIPSSPVKKSMNKYVIACAVLASMNSIILGYDGGVMSGAIIFIQEDLVITEVQEEVLVGSLNIISLAGAAIAGRTSDAIGRRWTMALAALIFLMGAAVMGLAPSFPLLMGGRLLAGVGVGFALMIAPVYTAELAPASGRGALTSLPEIFINAGILLGYISNYFLSGLPAHLSWRLMLGLGVFPSLLLGLGVLAMPESPRWLVMQNRIPEAMVVLSRTSDDQAEADARLAQIMDAAGVQGNDDAHQSGGHEGTSLDISNSPDAQKSHGEGVWLELLRPTPLVRRLLIIALGIQFFQQASGIDATVYYSPVVFKEAGIHSQEGILAATVAVGFAKTGFILVATFLLDRVGRRLLLLTSALGMTVSLMALAMGFDFIENTSETNKGAVILAILAVCCNVAFFSIGLGPVCWVLGSEIFPLRLRAQAVSLGVIVNRIVSGTVAMTFLSVSRAITVSGTFSLFACLSVLCVAFIYIFVPETKGKTLEEIVAFFDEEEAKRLSQGAELELGDTTSLVQKN*

Protein Length: 552

Fln nts: AGTCAATTTTTGCAGAACTTAAAACCTACGTGAATATACCCGGAGAACAAACAGGGGCTCTGGGAAACACTGGTGAGAAAAA_-_ATGAGAATGGGTTGGGGGAACAAGAAGAATCCTATGGTGTCCAATGAAGATCCGAAGCTTCCGGTTGGCAAATATGAACTGGTTAACAGCAATGGCATCCAAAGCAATTCTATTCCAAGTTCCCCTGTGAAGAAGTCTATGAACAAGTATGTCATTGCCTGTGCAGTTTTGGCATCAATGAACTCCATTATTCTTGGATACGATGGTGGTGTTATGAGTGGAGCAATTATATTTATTCAAGAGGATCTGGTTATAACAGAAGTACAAGAAGAGGTACTTGTTGGGTCGTTGAATATAATCTCTCTTGCGGGAGCAGCCATTGCAGGCAGGACCTCAGATGCAATAGGAAGAAGATGGACAATGGCTTTGGCAGCACTGATATTCCTGATGGGTGCAGCTGTAATGGGTTTGGCTCCTTCCTTTCCTCTGTTGATGGGAGGCAGGCTTTTAGCTGGGGTTGGTGTTGGGTTTGCTCTAATGATTGCCCCAGTCTATACTGCTGAGCTGGCCCCTGCATCCGGCCGAGGGGCACTCACATCACTTCCTGAAATCTTTATCAATGCAGGGATTCTTTTGGGGTACATCTCCAATTATTTTCTGTCAGGGCTTCCTGCTCATCTGAGCTGGAGATTGATGCTTGGTTTGGGGGTTTTTCCATCATTATTACTTGGATTAGGTGTCCTTGCCATGCCCGAATCCCCTAGATGGCTTGTTATGCAAAACAGGATCCCAGAAGCCATGGTCGTACTTTCAAGGACCTCGGATGATCAAGCCGAGGCTGATGCAAGATTGGCTCAAATTATGGATGCAGCAGGAGTTCAGGGAAATGATGATGCCCATCAATCAGGTGGGCATGAGGGAACTTCTTTAGACATATCCAATTCCCCTGATGCCCAAAAGAGTCATGGGGAAGGAGTCTGGCTTGAGCTCCTGAGGCCCACTCCCCTGGTCCGAAGACTGCTTATCATAGCCTTAGGGATTCAATTCTTCCAGCAAGCATCAGGCATTGATGCAACAGTCTATTACAGTCCAGTGGTTTTCAAAGAAGCTGGAATTCATAGCCAAGAAGGGATTCTTGCTGCCACCGTTGCAGTGGGCTTTGCAAAGACTGGATTTATCCTGGTGGCCACATTTTTGCTAGATCGTGTTGGGCGGAGACTATTGTTGCTTACCAGTGCCCTTGGAATGACTGTATCTTTGATGGCATTGGCAATGGGATTTGACTTCATAGAAAACACATCTGAAACCAATAAGGGAGCTGTGATTCTGGCTATATTGGCCGTGTGCTGCAATGTTGCTTTCTTCTCCATCGGATTAGGGCCGGTATGCTGGGTGTTAGGGTCTGAGATTTTCCCATTGAGGCTCCGAGCACAGGCAGTCAGTTTGGGTGTAATAGTAAACAGGATTGTTAGTGGGACAGTGGCAATGACTTTCTTGAGTGTTTCTAGGGCAATTACTGTGTCAGGTACATTTTCCCTTTTTGCTTGTCTATCAGTGCTCTGTGTAGCCTTCATATATATCTTTGTGCCCGAGACAAAGGGCAAAACTCTGGAAGAGATTGTGGCATTTTTTGATGAGGAAGAGGCAAAGAGACTGTCACAAGGCGCCGAGTTGGAGCTTGGGGACACAACATCTCTTGTCCAGAAAAACTGA___CTTCTCATACAATTACTGCTTGGATGGAATTTATTTGACTTCCTAAAACAAACATTGAAAAAATCATAATGGCCTTCGACATCAGAATATCTATTTTAGAAACACGGAGGATCAGAGATGGAGTTGAAACACCTGATGATTGTAATTCCAAAGCTATGTGTACAGTACATGTTCGATTAGCTTTTGCAGAAGGTCAGAACAGACAGACTAATGCATTTTTACCATATGTTTCCCCTCTGATTTGTGCTGTCATTTTTAAACTCAGTTCTGCAGTATCTCAAGCTTCTCTCCCATGATAGTCAATGCCTATTATACCTGCAAAGTTCTAGCTGGAGAAAGACTCAGTGCTATATGTCATGATCTGGCTTGTGTCGCTGTATGTGTTTCCTTTATGGACCTTCGGTATTGCATCTGTCCTTGATGTTTCTATTGTGGC

Fln Alignment:

CL89Contig1___SSPVKK-SMNKYVIACAVLASMNSIILGYDGGVMSGAIIFIQEDLVITEVQEEVLVGSLNIISLAGAAIAGRTSDAIGRRWTMALAALIFLMGAAVMGLAPSFPLLMGGRLLAGVGVGFALMIAPVYTAELAPASGRGALTSLPEIFINAGILLGYISNYFLSGLPAHLSWRLMLGLGVFPSLLLGLGVLAMPESPRWLVMQNRIPEAMVVLSRTSDDQAEADARLAQIMDAAG-VQGNDDAHQSGGHEGTSLDISNSPDAQKSHGEGVWXXXXXXXXXXXXXXIIALGIQFFQQASGIDATVYYSPVVFKEAGIHSQEGILAATVAVGFAKTGFILVATFXXXXXXXXXXXXTSALGMTVSLMALAMGFDFIENTSETNKG---AVILAILAVCCNVAFFSIGLGPVCWVLGSEIFPLRLRAQAVSLGVIVNRIVSGTVAMTFLSVSRAITVSGTFSLFACLSVLCVAFIYIFVPETKGKTLEEIVAFFDEEEA----KRLSQGAELELGDT
B8LLD6_______________SKPRKKIPRNKFVIACAVLASTNSILFGYDVGVMSGAVIFIKKDLKISDVQEEVLIGSLNIISLVGAALAGRTSDAIGRRWTMALAAFIFLVGALVMAVSPSFAWLMVGRSVAGIGVGYALLIAPVYTAEVAPAASRGCLTCFPEIFINVGILIGYIANYALAGLPGNVNWRVMLGVGAVPPLFLGIAVLMMPESPRWLVMRNRNDDAMKVLLRTSVNQAEASERLDQIMEGIRYAQVNASVKKS----------SNPNEISKSDGEGKWHELYRPSRAIRRMLIIALGIQFFQQAGGIDATVYYSPVTFKTAGIKSQEGILGATMAVGFAKAGFVIVAAFLIDKVGRRPLLLTSAIGSTVSLVALASALAIIGKKSTVGMGSEAASYLAVIAACSNVAFFSVGMGPVNWVLGAEIFPLRLRAKAASLGVGVNRGMSGVVSMTFISISNAITVPGTFYLFAGVSALCSIFIYFCVPETKGKTLEEIVESFHVKARGSPDKTAMGPSELELGNS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain