UniGene Name: sp_v3.0_unigene46860
Length: 138 nt
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>sp_v3.0_unigene46860
C |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | 2-oxoglutarate dehydrogenase, E1 subunit-like protein n=6 Tax=Arabidopsis RepID=Q84VW8_ARATH | - | - | 5.0e-13 | 78% |
FL-Next | tr=2-oxoglutarate dehydrogenase, E1 subunit-like protein; Arabidopsis thaliana (Mouse-ear cress). | - | - | 0.0 | 78% |
Source | ECs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Oxoglutarate dehydrogenase (succinyl-transferring). | EC:1.2.4.2 | - | 8.333e-12 | - |
Source | KEGGs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Citrate cycle (TCA cycle) | 00020 | 8.333e-12 | % | |
Sma3 | Lysine degradation | 00310 | 8.333e-12 | % | |
Sma3 | Tryptophan metabolism | 00380 | 8.333e-12 | % | |
Sma3 | Biosynthesis of phenylpropanoids | 01061 | 8.333e-12 | % | |
Sma3 | Biosynthesis of terpenoids and steroids | 01062 | 8.333e-12 | % | |
Sma3 | Biosynthesis of alkaloids derived from shikimate pathway | 01063 | 8.333e-12 | % | |
Sma3 | Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid | 01064 | 8.333e-12 | % | |
Sma3 | Biosynthesis of alkaloids derived from histidine and purine | 01065 | 8.333e-12 | % | |
Sma3 | Biosynthesis of alkaloids derived from terpenoid and polyketide | 01066 | 8.333e-12 | % | |
Sma3 | Biosynthesis of plant hormones | 01070 | 8.333e-12 | % | |
Sma3 | Metabolic pathways | 01100 | 8.333e-12 | % | |
Sma3 | Biosynthesis of secondary metabolites | 01110 | 8.333e-12 | % |
Source | Gene names |
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Sma3 | At3g55410; At5g65750; F6H11.130; GSVIVT00018534001; MICPUCDRAFT_35900; MICPUN_104793; OSIGBa0096P03.7; Os04g0390000; Os07g0695800; OsI_15669; OsJ_14584; P0627E10.28; PHYPADRAFT_175076; POPTRDRAFT_724772; POPTRDRAFT_820318; RCOM_0465600; RCOM_0465620; T22E |
Source | GOs | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | mitochondrion | GO:0005739 | Cellular Component | 0.0 | - |
Sma3 | oxoglutarate dehydrogenase (succinyl-transferring) activity | GO:0004591 | Molecular Function | 0.0 | - |
Sma3 | thiamine pyrophosphate binding | GO:0030976 | Molecular Function | 0.0 | - |
Sma3 | glycolysis | GO:0006096 | Biological Process | 0.0 | - |
Sma3 | oxidation-reduction process | GO:0055114 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
---|---|---|---|---|---|
Sma3 | Dehydrogenase, E1 component | IPR001017 | - | 0.0 | - |
Sma3 | Transketolase-like, pyrimidine-binding domain | IPR005475 | - | 0.0 | - |
Sma3 | 2-oxoglutarate dehydrogenase, E1 component | IPR011603 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
---|---|---|---|---|---|
ATG | Arabidoptis thaliana | AT3G55410.1 | 2-oxoglutarate dehydrogenase, E1 component chr3:20541897-20545728 FORWARD LENGTH=1017 | 6.0e-18 | 78% |
RefSeq | Arabidopsis thaliana | NP_191101.2 | 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] | 8.0e-18 | 78% |
RefSeq | Populus trichocarpa | XP_002315242.1 | predicted protein [Populus trichocarpa] | 1.0e-17 | 78% |
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Fln status: Internal
Fln database: tr_plants
Fln subject: Q9M2T8
Fln msg: Distance to subject end: 856 aas, your sequence is shorter than subject: 46 - 1009
Fln protein:
P
Protein Length:
47
Fln nts:
C
Fln Alignment:
CL13531Contig1___PALSGQTIQESMRLLLLVKAYQVNGHFKANLDPLGLSSRPVPADLD
Q9M2T8_______________PGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEQREIPEDLD
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain