SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene46774

Length: 150 nt

UniGene Fasta

>sp_v3.0_unigene46774
ACGGCAGTATTCTGACACATTAGTGCCAACCTGTATCCAAACTCTGGAGGTCATGATTCAATTGGAAGGTTCTGGGAAGTGGCCTATTGGTGAAATAGCAATTGAGAAAACCAAATCTGCCTTCTGTCTCAAAATTGCTGAGAGTATGCA

Ace file of the UniGene sp_v3.0_unigene46774

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Nucleolar RNA-associated protein, putative n=1 Tax=Ricinus communis RepID=B9ST37_RICCO	-	-	8.0e-11	71%
FL-Next	tr=Nucleolar RNA-associated protein, putative; Ricinus communis (Castor bean).	-	-	0.0	71%

Source	Gene names
Sma3	At1g63810; GSVIVT00024923001; GSVIVT00025815001; LOC_Os12g06910; OsI_37603; OsJ_35345; RCOM_0248560; T12P18.17;

Source	InterPros	Term	Type	e value	Identity
Sma3	Nrap protein	IPR005554	-	0.0	-
Sma3	Peptidase C14, ICE, catalytic subunit p20, active site	IPR016129	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT1G63810.1	" CONTAINS InterPro DOMAIN/s: Nrap protein (InterPro:IPR005554); Has 396 Blast hits to 382 proteins in 182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi - 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). chr1:2366969	4.0e-15	69%
RefSeq	Arabidopsis thaliana	NP_176566.3	uncharacterized protein [Arabidopsis thaliana]	6.0e-15	69%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9ST37

Fln msg: Distance to subject end: 380 aas, your sequence is shorter than subject: 49 - 1046

Fln protein: RQYSDTLVPTCIQTLEVMIQLEGSGKWPIGEIAIEKTKSAFCLKIAESM

Protein Length: 50

Fln nts: ACGGCAGTATTCTGACACATTAGTGCCAACCTGTATCCAAACTCTGGAGGTCATGATTCAATTGGAAGGTTCTGGGAAGTGGCCTATTGGTGAAATAGCAATTGAGAAAACCAAATCTGCCTTCTGTCTCAAAATTGCTGAGAGTATGCA

Fln Alignment:

CL12582Contig1___SDTLVPTCIQTLEVMIQLEGSGKWPIGEIAIEKTKSAFCLKIAESM
B9ST37_______________SHKLISSCIQPLEVMIQLEGSGNWPMDEVAIEKTKSAFLLKIGESL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain