SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene46163

Length: 1214 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene46163

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gb\|AAK50084.1\|AF372944_1 AT4g32400/F8B4_100 [Arabidopsis thaliana] emb\|CAA22567.1\| adenylate translocator (brittle-1)-like protein [Arabidopsis thaliana] emb\|CAB79957.1\| adenylate trans	-	-	1.0e-27	27%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	24%

Source	Gene names
Sma3	PHYPADRAFT_171446;

Source	GOs	Term	Type	Identity
Sma3	mitochondrial inner membrane	GO:0005743	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3		IPR001993	-	-
Sma3	Mitochondrial carrier protein	IPR002067	-	-
Sma3	Mitochondrial substrate/solute carrier	IPR018108	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LMT2

Fln msg: your sequence is shorter than subject: 363 - 404

Fln protein: CLSSGINAEYAGKAAMDETKEKGKEVAQSLRVPVPNTNIPFVGHVDSLALKQLLCGTIAGGVSGIAAAPFEFLRSKAVAGKGGTSVREVFSDTLRKEGIEFIKKGSLVSGIMTSAVQRGVMFLTYEAVKRREENKFGRDVKWLPGLPREVSVSSVAGAVAAFVSTLVTYPMGTVGDRMFLKGNEYKSMSDAIGKIIMNEGIGELYRGVIPRLIRMVPDGAAGFYTYETLKRRHIEKKKKKKNKNDNGVKGKEIGALPSLCFGAIAGLVSTTLSYPLDNITTMMSMKKLPKGGGALEPRGTNMFQTLRKTVAREGAGLRGLYRGVGLRYAEIIPVTALSFMVYEFAKRVLIARHKEKPHEFKG*

Protein Length: 364

Fln nts: CTGCTTAAGCAGTGGTATCAACGCAGAGTACGCGGGGAAGGCCGCCATGGACGAGACGAAGGAGAAAGGAAAGGAAGTAGCCCAGTCACTCAGGGTTCCCGTGCCCAACACCAACATACCATTTGTAGGCCATGTCGATAGCCTCGCTCTCAAACAGTTGTTATGCGGCACCATAGCTGGCGGTGTTTCGGGCATAGCTGCTGCGCCCTTCGAATTTCTCCGCTCGAAAGCGGTGGCGGGGAAGGGCGGAACTTCTGTTCGGGAGGTGTTCTCGGATACTCTGAGGAAAGAAGGGATCGAATTCATAAAGAAAGGCAGCTTGGTGTCTGGGATTATGACATCTGCTGTTCAGAGGGGTGTCATGTTTTTGACTTATGAAGCAGTTAAGAGAAGGGAAGAGAATAAATTCGGACGGGATGTCAAGTGGCTGCCCGGGTTGCCCAGAGAGGTTTCTGTTTCTTCTGTGGCCGGAGCCGTGGCTGCGTTCGTTTCCACTCTTGTCACATACCCCATGGGTACTGTCGGAGATAGGATGTTTCTCAAGGGTAACGAGTACAAATCAATGAGCGACGCCATTGGAAAGATCATAATGAATGAAGGAATTGGAGAGCTATACCGTGGTGTGATACCCAGGCTCATAAGGATGGTGCCCGATGGAGCTGCAGGTTTTTACACATATGAAACTCTCAAGAGACGCCACATTGAGAAGAAGAAGAAGAAGAAGAATAAGAATGACAATGGTGTTAAGGGAAAAGAGATTGGGGCTCTTCCTTCCCTGTGTTTTGGTGCCATCGCTGGTTTGGTTTCCACCACTTTGTCATATCCACTGGACAACATTACAACGATGATGAGTATGAAGAAATTGCCCAAGGGAGGAGGAGCTCTGGAGCCTAGAGGAACAAATATGTTTCAGACATTGAGGAAAACTGTTGCAAGAGAAGGTGCAGGACTCCGAGGTTTGTACAGAGGAGTTGGGTTGAGATATGCAGAGATTATTCCTGTCACTGCCCTGTCCTTCATGGTTTATGAGTTTGCAAAGAGGGTTCTCATTGCTCGTCACAAGGAAAAACCACATGAATTCAAAGGGTGA___CCCTGTGGGTGCTGTATATATTGTTTTCTTCAAAATGTGAGTGAGTTTGGACAGATTGGAATCTTATGTTGTATGTAAATTATCTTGCTTTGTTTATCCACTGGATGGAGGCTTAGTAGTTTCT

Fln Alignment:

CL3319Contig1___FVGHVDSLA-LKQLLCGTIAGGVSGIAAAPFEFLRSKAVAGKGGTSVREVFSDTLRKEGIEFIKKGSLVSGIMTSAVQRGVMFLTYEAVKRREENKFGRDVKWLPGLPREXXXXXXXXXXXXXXXTLVTYPMGTVGDRMFLKGNEYKSMSDAIGKIIMNEGIGELYRGVIPRLIRMVPDGAAGFYTYETLK
B8LMT2_______________FKGKNEELSVLGRLAAGACAGMTSTLVTYPLDVLRLRLAVDPACKTMSQVAINMMREEGLASFYKG-LGPSLIGIAPYIAVNFCIFDLVKKSLPEEYRKKTE----------ASFTTAIISASFATILCYPLDTIRRQMQMKGSPYKTVFAAFPGIIARDGVIGLYRGFVPNALKNLPNSSIRLTTFDAAK

SSRs (tot: 1)

Start position	End position	Sequence	Length
705	726	AGA AGA AGA AGA AGA AGA AGA A	22

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain