SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene46066

Length: 1481 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene46066

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Phosphoenolpyruvate carboxylase kinase n=3 Tax=Coffea RepID=F2Y9F2_COFAR	-	-	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Sma3	Putative uncharacterized protein	-	-	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G10660.1	CPK2, ATCPK2 calmodulin-domain protein kinase cdpk isoform 2 chr3:3331599-3334268 REVERSE LENGTH=646	51%
RefSeq	Arabidopsis thaliana	NP_187677.1	calmodulin-domain protein kinase cdpk isoform 2 [Arabidopsis thaliana]	51%
RefSeq	Populus trichocarpa	XP_002319653.1	predicted protein [Populus trichocarpa]	49%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LP72

Fln msg:

Fln protein: MTDALLKNYQLQEEVIGRGRFGVIRRCFNKQSGQQAACKTITKTDLLHDSIDRECLNNEIKIMQYLAGHPTVVALHDAYEDDEYVHLVMEMCSGGDLFDRIVSRKNTVPFSEEEAATILQKLMEAISYCHSLGIAHRDIKPDNILFANNSNSLAQIKLADFGQASSFAPGQGLMQGIVGTPYYVAPEVLEGKDYNEKVDVWSAGAILYIMLSGVPPFFGDSPQEIFEAVLFGRLRFPTDQWLSISHSAKDLIRRMLCRDVTKRLSAHQVLEHPWITTHALCNPS*

Protein Length: 286

Fln nts: AGCAACAGCCGCAAGCCAAGAACGCACAAGCAACAGCAGCAAAA_-_ATGACGGATGCCCTCCTTAAAAACTACCAATTGCAAGAAGAAGTAATCGGCAGAGGAAGATTCGGAGTCATCAGGAGATGTTTCAACAAGCAAAGTGGGCAACAGGCCGCCTGCAAAACCATAACAAAAACAGATCTCCTTCACGATTCCATCGACAGAGAATGCCTCAACAACGAAATCAAGATCATGCAGTATCTCGCAGGGCACCCAACAGTGGTTGCCCTTCACGACGCTTATGAGGATGATGAGTATGTCCATCTGGTAATGGAGATGTGCTCAGGCGGAGACCTGTTCGACAGAATCGTTAGCAGGAAGAATACAGTACCCTTCTCCGAAGAAGAGGCCGCCACCATCCTGCAAAAGCTCATGGAAGCCATCAGTTACTGTCACTCCTTGGGAATTGCCCACCGCGATATAAAACCTGACAACATTCTCTTTGCAAATAATTCAAATTCCCTCGCTCAAATCAAACTTGCAGACTTTGGGCAGGCCTCATCTTTCGCTCCAGGGCAAGGATTAATGCAAGGAATTGTGGGTACTCCCTATTACGTAGCACCGGAGGTGTTGGAAGGGAAGGATTACAATGAGAAAGTGGATGTGTGGAGCGCAGGGGCGATCCTGTACATAATGCTTAGTGGCGTTCCCCCTTTCTTCGGAGACTCACCGCAGGAGATATTTGAGGCAGTCCTCTTTGGGCGTCTTCGCTTCCCAACTGATCAGTGGCTGTCGATATCTCACTCTGCCAAGGACTTGATACGCCGGATGCTCTGCAGAGACGTTACCAAGAGACTCAGCGCACACCAAGTGCTAGAGCATCCATGGATCACCACTCATGCCCTGTGCAATCCCAGCTAA___TTTGATTAAGCCAAAGTGTTTTGGGGCATGGACGGTGAAAATGAGATATGCAAACGATGAGATGTTATGTTCTATAACGTTGTAAAGCTTAATAGTTCGTGAGCCTGTGGCAGAGAGCCTGGTTCGATTCTCGCTATCTGACCTATGGGTGTGTTGTCCGCCCGAGTCCTTACGGCGAGCATGCTCATGTTTCTGTGTAAAATATTACCTTGTGGAAGACCTCTTGTCTGGTCTTTTACGTTTTGGTGGAGAACCCATCTCCGTATGTAACAGGTTTTGATTGCAAAACGCGGCATCTGATACAGAGATATTTTGAGCAATGGAGACGGAATTCCACTGGCTTTTGCAAATGGAAGAGTTGCAGGCTTGTACAGTGGAGAAAGAGAGTACCGTTAGAGTAGGTCCGTAGATAATTTGGGAAGTCACAGTTGCATAGTGCGTGATATACTGTCTCTGTAAATATGCCAAATACCTATAAATGAGTGTAGTGCGAGAGCAGTGGGTGATATAAATGAGTATTCTGCGGGAGCAATGGGGAATATACAGTGTAATTTTGTCAATGAATAAAAGGATAGACAGAGA

Fln Alignment:

CL1551Contig2___MTDALLKNYQLQEEXXXXXXXXXXXXCFNKQSGQQAACKTITKTDLLHDSIDRECLNNEIKIMQYLAGHPTVVALHDAYEDDEYVHLVMEMCSGGDLFDRIVSRKNTVPFSEEEAATILQKLMEAISYCHSLGIAHRDIKPDNILFANNSNSLAQIKLADFGQASSFAPGQGLMQGIVGTPYYVAPEVLEGKDYNEKVDVWSAGAILYIMLSGVPPFFGDSPQEIFEAVLFGRLRFPTDQWLSISHSAKDLIRRMLCRDVTKRLSAHQVLEHPWITTHALCNPS
B8LP72_______________MTDALLQDYQLQEEVIGRGRFGVIRRCFNKRSGQQAACKTIRKADL-HDSIDRECLNSEIKIMQYVSGHPTVVALHDVYEDDDFVHLVMEMCSGGDLFDRIVSKKSTVPFSEEEAATILQKLMEAISYCHSMGIAHRDIKPDNILFANNSNFLTEIKLADFGQASSFSPGQGLMQGIVGTPYYVAPEVLGGKDYSEKVDVWSAGVIVYIMLSGVAPFLGDTPQEIFEAVLCGRLRFPSDPWLSISNSAKDLIRRMVCRDVTKRLSAHQVLEHPWITTHALRNPS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain