UniGene Name: sp_v3.0_unigene45856
Length: 128 nt
UniGene Fasta |
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>sp_v3.0_unigene45856
A |
Ace file of the UniGene sp_v3.0_unigene45856 |
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Annotations |
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Source | Descriptions | Term | Type | e value | Identity |
---|---|---|---|---|---|
AutoFact | Protein translocase subunit secA n=3 Tax=Poaceae RepID=Q657P0_ORYSJ | - | - | 4.0e-13 | 85% |
FL-Next | sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). | - | - | 0.0 | 85% |
Sma3 | Protein translocase subunit secA | - | - | 0.0 | - |
Source | Gene names |
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Sma3 | At4g01800; CHLREDRAFT_131439; F8K7.6; GSVIVT00015443001; Grc000191; Heak293_Cp114; MICPUCDRAFT_34584; MICPUCDRAFT_45843; MICPUN_101824; MICPUN_103130; OSTLU_36933; OSTLU_49779; Os01g0321300; OsI_01632; OsI_25593; OsJ_01526; OsJ_33268; Ot01g04020; Ot04g033 |
Source | GOs | Term | Type | e value | Identity |
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Sma3 | chloroplast | GO:0009507 | Cellular Component | 0.0 | - |
Sma3 | chloroplast stroma | GO:0009570 | Cellular Component | 0.0 | - |
Sma3 | thylakoid | GO:0009579 | Cellular Component | 0.0 | - |
Sma3 | chloroplast envelope | GO:0009941 | Cellular Component | 0.0 | - |
Sma3 | membrane | GO:0016020 | Cellular Component | 0.0 | - |
Sma3 | protein binding | GO:0005515 | Molecular Function | 0.0 | - |
Sma3 | ATP binding | GO:0005524 | Molecular Function | 0.0 | - |
Sma3 | electron carrier activity | GO:0009055 | Molecular Function | 0.0 | - |
Sma3 | protein disulfide oxidoreductase activity | GO:0015035 | Molecular Function | 0.0 | - |
Sma3 | protein targeting | GO:0006605 | Biological Process | 0.0 | - |
Sma3 | protein import | GO:0017038 | Biological Process | 0.0 | - |
Sma3 | cell redox homeostasis | GO:0045454 | Biological Process | 0.0 | - |
Sma3 | intracellular protein transmembrane transport | GO:0065002 | Biological Process | 0.0 | - |
Source | InterPros | Term | Type | e value | Identity |
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Sma3 | SecA protein | IPR000185 | - | 0.0 | - |
Sma3 | WD40 repeat | IPR001680 | - | 0.0 | - |
Sma3 | Zinc finger, RING-type | IPR001841 | - | 0.0 | - |
Sma3 | DNA methylase, N-6 adenine-specific, conserved site | IPR002052 | - | 0.0 | - |
Sma3 | Glutaredoxin | IPR002109 | - | 0.0 | - |
Sma3 | SecA DEAD-like, N-terminal | IPR011115 | - | 0.0 | - |
Sma3 | SecA Wing/Scaffold | IPR011116 | - | 0.0 | - |
Sma3 | SecA preprotein, cross-linking domain | IPR011130 | - | 0.0 | - |
Sma3 | SecA motor DEAD | IPR014018 | - | 0.0 | - |
Sma3 | WD40/YVTN repeat-like-containing domain | IPR015943 | - | 0.0 | - |
Sma3 | WD40-repeat-containing domain | IPR017986 | - | 0.0 | - |
Sma3 | Zinc finger, C3HC4 RING-type | IPR018957 | - | 0.0 | - |
Sma3 | IPR019782 | - | 0.0 | - |
Source | Species | ID | Description | e value | Identity |
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ATG | Arabidoptis thaliana | AT1G21650.3 | SECA2 Preprotein translocase SecA family protein chr1:7592891-7604152 REVERSE LENGTH=1805 | 1.0e-11 | 67% |
RefSeq | Arabidopsis thaliana | NP_192089.1 | preprotein translocase subunit secA [Arabidopsis thaliana] | 1.0e-17 | 83% |
RefSeq | Populus trichocarpa | XP_002320935.1 | predicted protein [Populus trichocarpa] | 2.0e-15 | 77% |
Full-Lengther Next Prediction |
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Fln status: Internal
Fln database: sp_plants
Fln subject: Q36795
Fln msg: Distance to subject end: 732 aas, your sequence is shorter than subject: 42 - 1036
Fln protein:
T
Protein Length:
43
Fln nts:
A
Fln Alignment:
CL22447Contig1___TNSELGFDYLRDNLATTLDELVMRLFNFCIIDEVDSILIDEA
Q36795_______________TNSELGFDFLRDNLATSVDELVLRGFNFCVIDEVDSILIDEA
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain