SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene45661

Length: 205 nt

UniGene Fasta

>sp_v3.0_unigene45661
GAGACATGTGGATCAGTACAAGCATCACACACTTCACTCTTTACAATTGATGAAAATGTTCTCCCACTTGGTGCCGCAATGCATGCTGCCATAGCTGAAAGGTACCTTAATGAAGGCAAGTCTAGGGCTTCTCAGTTTTCAGTAGCAGGCACTTCCATATCACAGTGAAGTCTGAGATAAAGGAACTTAAGTGACACCAAGTTAG

Ace file of the UniGene sp_v3.0_unigene45661

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	auxin conjugate hydrolase [Medicago truncatula]	-	-	1.0e-06	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase M20	IPR002933	-	-
Sma3		IPR010168	-	-
Sma3	Peptidase M20, dimerisation	IPR011650	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQG8

Fln msg: your sequence is shorter than subject: 56 - 487

Fln protein: ETCGSVQASHTSLFTIDENVLPLGAAMHAAIAERYLNEGKSRASQFSVAGTSISQ*

Protein Length: 57

Fln nts: GAGACATGTGGATCAGTACAAGCATCACACACTTCACTCTTTACAATTGATGAAAATGTTCTCCCACTTGGTGCCGCAATGCATGCTGCCATAGCTGAAAGGTACCTTAATGAAGGCAAGTCTAGGGCTTCTCAGTTTTCAGTAGCAGGCACTTCCATATCACAGTGA___AGTCTGAGATAAAGGAACTTAAGTGACACCAAGTTAG

Fln Alignment:

CL20075Contig1___ETCGSVQASHTSLFTIDENVLPLGAAMHAAIAERYLNEGKSRASQFSVAGTSISQ
B8LQG8_______________ETCGSIHAPHTSLFTVDENVLPLGAAMHAAIAERYLNEGKSRPSQFSVADTSILQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain