SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene45482

Length: 1448 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene45482

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	guanylyl cyclase [Solanum lycopersicum]	-	-	0.0	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%
Sma3	Guanylyl cyclase	-	-	2.454e-26	-

Source	Gene names
Sma3	At5g05930; CHLREDRAFT_98614; GSVIVT00018367001; MICPUCDRAFT_36926; MICPUN_50423; OJ1126_D01.8; Os05g0453500; OsI_20176; OsJ_18763; PHYPADRAFT_149742; PHYPADRAFT_170873; POPTRDRAFT_720589; RCOM_1483470; VITISV_014350;

Source	GOs	Term	Type	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	peptidase activity	GO:0008233	Molecular Function	-
Sma3	proteolysis	GO:0006508	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase C39, bacteriocin processing	IPR005074	-	0.0	-
Sma3	Guanylyl cyclase	IPR018616	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G05930.1	ATGC1, GC1 guanylyl cyclase 1 chr5:1780270-1782659 REVERSE LENGTH=274	62%
RefSeq	Arabidopsis thaliana	NP_568159.1	guanylyl cyclase 1 [Arabidopsis thaliana]	62%
RefSeq	Populus trichocarpa	XP_002311194.1	predicted protein [Populus trichocarpa]	60%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5ACA7

Fln msg: your sequence is longer than subject: 293 - 146

Fln protein: MDATVAGRPSLGRSSLLSPERNNGHSRMENSGWVAASLLESYTWDSSYSPLIDSSIDVPRSRFVEVPHVRQLWTWDCGLACVLMVLKALGIEDCDMESLAKLCSTTSIWTVDLAHLLRRFSINVSFLTVTIGANPNFARETFYKEHMAEDGERVNGLFEKAPQAGIQIQWRSISGEELSMLILSGNYIAIALVDKYKLSQPWLEELCLSDCCGVSSGYTGHYVVICGYDMETNEFEIRDPASSRESERISLWCLDEARKSFGTDEDILLISFDKFDRETRAKFSVNCMNKEL*

Protein Length: 294

Fln nts: ATTAAAGGATTTGGTTAAAGACTTGTCAAGTTGCGAAGTGGACTGAGAGATCTCGCAGTCAACTGTAATCCGATACATTGTTCCATTTCGTACTGTGAGATTATCCATTTAGATCCAGGAATTCCTCTAATCACAATTGGTCTACTCTCCGAGGATGAATCCACTGTGCCAATACTTGAGATTTTGTGATGTCAAGAATAAGGAAGGGCTGACACAGTGATTGATACTCAGAAA_-_ATGGATGCAACAGTGGCGGGGCGACCATCGCTTGGTAGGTCGTCCCTCCTCTCACCAGAGAGGAACAATGGACACTCTCGCATGGAAAACAGTGGATGGGTAGCTGCTTCTTTACTTGAATCATATACTTGGGATTCTTCTTATTCTCCTCTAATAGATTCCAGCATTGATGTTCCTCGCTCTAGGTTTGTGGAGGTTCCTCATGTTCGACAACTGTGGACTTGGGATTGTGGCCTTGCATGTGTTTTGATGGTCTTGAAAGCTCTAGGCATTGAAGACTGTGATATGGAATCCTTGGCCAAACTTTGCAGCACGACAAGTATTTGGACTGTTGATTTGGCGCATTTGTTACGAAGATTTTCTATTAATGTGTCTTTTCTCACTGTTACTATTGGAGCAAACCCCAATTTTGCACGAGAGACCTTTTATAAGGAGCATATGGCAGAAGATGGGGAGCGTGTGAATGGACTGTTTGAGAAAGCTCCACAGGCTGGCATTCAAATCCAGTGGAGATCTATCAGTGGTGAAGAACTCTCTATGCTTATCTTATCAGGAAACTATATTGCCATTGCGTTAGTTGACAAGTACAAACTCAGCCAGCCCTGGTTGGAGGAATTGTGCCTTTCAGACTGCTGTGGAGTAAGCTCAGGATACACAGGTCATTATGTCGTAATTTGTGGCTATGATATGGAAACTAATGAATTTGAAATAAGAGATCCAGCAAGCTCTAGAGAAAGTGAGAGAATCTCCCTATGGTGCTTAGATGAAGCTCGGAAATCCTTTGGCACAGATGAAGATATTCTTCTGATTTCATTTGACAAATTTGACAGGGAGACGAGAGCCAAGTTTTCCGTCAATTGTATGAATAAAGAATTGTAG___CTTCAATCCATATACGATTTCCCAATCTTATGAGCCAAGATAATTTGGTAATTTGTATTTTATTTACCAGGTACAACTTTATTGCACTGTTTATCCATTTTCTATTCATTTGTAAACTGAGAAATAGTACATTTGAACTGTAAGAATATTCTGAATAAGCTCATCAATGCACTCATACTACTATTCGTAGTTGAGCTCGATGTTGTGAGAACCGACTGCTAATTGGTTTATCAATTCTTTGGATGTAGTTGAATTTGTCCCAATTTCTCGTGGGATTATCATTTATATAAAGTAAACAAATATTTGAATACTGTAAACTGATTCTCGCGCCCATC

Fln Alignment:

CL18096Contig1___MAEDGERVNGLFEKAPQAGIQIQWRSISGEELSMLILSGNYIAIALVDKYKLSQPWLEELCLSDCCGVSSGYTGHYVVICGYDMETNEFEIRDPASSRESERISLWCLDEARKSFGTDEDILLISFDKFDRETRAKFSVNCMNKEL
D5ACA7_______________MAEDGERVNGLFEKAPQAGIQIQWRSISGEELSMLILSGNYVAIALVDKYKLSQPWLEELCLSDCCGVSSGYTGHYVVICGYDMETNEFEIRDPASSRESERISLWCLDEARKSFGTDEDILLISFDKFDRERRATFSVNCMNKEL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain