SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene45317

Length: 203 nt

UniGene Fasta

>sp_v3.0_unigene45317
TCCATACGGGGTGTTGTGGATGGCCCCTTTTCTGTCGGGAGGTGGGTATAGTTCTGAAGCTTGGTCATATGTGGCCGCATTGGAGGCAACTAAGAGTGTACCCAGGATAAGGATATTACAACATGGGGATTTGGAAAACTTTCAATTCTGGACTGGTTTGCCTGATGACATGAAGGCCCTTGCAATTAAATTATATGGAGGCA

Ace file of the UniGene sp_v3.0_unigene45317

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glycosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RSB3_RICCO	-	-	2.0e-15	62%
FL-Next	tr=Glycosyltransferase, putative; Ricinus communis (Castor bean).	-	-	0.0	62%

Source	Gene names
Sma3	At3g10630; F13M14.8; F18K10.25; GSVIVT00013800001; Os09g0296700; OsI_30774; OsJ_28743; P0592C05.20; POPTRDRAFT_563555; RCOM_1653010; VITISV_042240;

Source	GOs	Term	Type	Identity
Sma3	transferase activity	GO:0016740	Molecular Function	-
Sma3	transferase activity, transferring glycosyl groups	GO:0016757	Molecular Function	-
Sma3	biosynthetic process	GO:0009058	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycosyl transferase, family 1	IPR001296	-	0.0	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G10630.1	UDP-Glycosyltransferase superfamily protein chr3:3321722-3323185 REVERSE LENGTH=487	2.0e-19	58%
RefSeq	Arabidopsis thaliana	NP_566378.1	glycosyl transferase family 1 protein [Arabidopsis thaliana]	2.0e-19	58%
RefSeq	Populus trichocarpa	XP_002311937.1	predicted protein [Populus trichocarpa]	5.0e-18	59%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RSB3

Fln msg: Distance to subject end: 338 aas, your sequence is shorter than subject: 67 - 496

Fln protein: PYGVLWMAPFLSGGGYSSEAWSYVAALEATKSVPRIRILQHGDLENFQFWTGLPDDMKALAIKLYGG

Protein Length: 68

Fln nts: TCCATACGGGGTGTTGTGGATGGCCCCTTTTCTGTCGGGAGGTGGGTATAGTTCTGAAGCTTGGTCATATGTGGCCGCATTGGAGGCAACTAAGAGTGTACCCAGGATAAGGATATTACAACATGGGGATTTGGAAAACTTTCAATTCTGGACTGGTTTGCCTGATGACATGAAGGCCCTTGCAATTAAATTATATGGAGGCA

Fln Alignment:

CL16270Contig1___VLWMAPFLSGGGYSSEAWSYVAALEATKSVP--RIRILQHGDLENFQFWTGLPDDMKALAIKLY
B9RSB3_______________VLWMAPFLSGGGYSSEAWSYMLALNEHTKVPSFRLKVEQHGDLESIEFWEGLPLHIKQLAFNLH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain