SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene45036

Length: 245 nt

UniGene Fasta

>sp_v3.0_unigene45036
TCAGAAATATGGAAACGTGTTCACCACTTCTCTTGTTGGCCACCCAACTGTTGTACTTTGCAGTGCCGAAGGCAGCCGTTTCTTGTTCTCCAACGAGAACAAACTGGTCGTCAATTCATGGCCCACTTCCGTGGGAAATCTCTTCCCAAGGTCTCTAATTACAGCCGTTGGAGACGATGGGAAGAGGTTGAGGAGAATCCTGATGACGTTTCTGAGGCCGGAAGCCCTTCAAAAATTTGTAGGGC

Ace file of the UniGene sp_v3.0_unigene45036

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytochrome P450 716B2 n=2 Tax=Picea sitchensis RepID=C16B2_PICSI	-	-	7.0e-34	87%
FL-Next	sp=Cytochrome P450 716B1; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%

Source	Gene names
Sma3	CYP716B1; CYP716B2; GSVIVT00024834001; VITISV_041016;

Source	GOs	Term	Type	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G36110.1	CYP716A1 cytochrome P450, family 716, subfamily A, polypeptide 1 chr5:14195377-14197613 FORWARD LENGTH=477	1.0e-20	50%
RefSeq	Arabidopsis thaliana	NP_198460.1	cytochrome P450, family 716, subfamily A, polypeptide 1 [Arabidopsis thaliana]	2.0e-20	50%
RefSeq	Populus trichocarpa	XP_002310350.1	cytochrome P450 [Populus trichocarpa]	2.0e-22	49%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q50EK1

Fln msg: Distance to subject end: 328 aas, your sequence is shorter than subject: 81 - 493

Fln protein: QKYGNVFTTSLVGHPTVVLCSAEGSRFLFSNENKLVVNSWPTSVGNLFPRSLITAVGDDGKRLRRILMTFLRPEALQKFVG

Protein Length: 82

Fln nts: TCAGAAATATGGAAACGTGTTCACCACTTCTCTTGTTGGCCACCCAACTGTTGTACTTTGCAGTGCCGAAGGCAGCCGTTTCTTGTTCTCCAACGAGAACAAACTGGTCGTCAATTCATGGCCCACTTCCGTGGGAAATCTCTTCCCAAGGTCTCTAATTACAGCCGTTGGAGACGATGGGAAGAGGTTGAGGAGAATCCTGATGACGTTTCTGAGGCCGGAAGCCCTTCAAAAATTTGTAGGGC

Fln Alignment:

CL13205Contig1___QKYGNVFTTSLVGHPTVVLCSAEGSRFLFSNENKLVVNSWPTSVGNLFPRSLITAVGDDGKRLRRILMTFLRPEALQKFVG
Q50EK1_______________QKYGNVFTTSLVGHPTVVFCSPEGNRFLFSNENKLVVNSWPSSVGNLFRSSLITTVGDDAKRLRRILMTFLRPEALREFVG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain