SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene44606

Length: 827 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene44606

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI	-	-	85%
FL-Next	sp=Probable phospholipid hydroperoxide glutathione peroxidase; Spinacia oleracea (Spinach).	-	-	78%
Sma3	Glutathione peroxidase	-	-	-

Source	ECs	Term	Type	e value	Identity
Sma3	Phospholipid-hydroperoxide glutathione peroxidase.	EC:1.11.1.12	-	1.4013e-45	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Glutathione metabolism	00480		1.4013e-45	%
Sma3	Glutathione peroxidase.	EC:1.11.1.9	-	4.024e-29	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Glutathione metabolism	00480		4.024e-29	%
Sma3	Arachidonic acid metabolism	00590		4.024e-29	%

Source	Gene names
Sma3	AP2_C11.1; AT2G31570; At1g63460; At2g25080; At2g31570; At2g43350; At2g48150; At3g63080; At4g11600; At4g31870; BarPHGPX; CHLREDRAFT_137012; CHLREDRAFT_143122; CHLREDRAFT_188373; CHLREDRAFT_206090; CSA; F11C18.70; F11L15.5; F13D4.40; F2K11.16; GHPOD; GP; GP

Source	GOs	Term	Type	Identity
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	cytosol	GO:0005829	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	chloroplast thylakoid membrane	GO:0009535	Cellular Component	-
Sma3	plastid	GO:0009536	Cellular Component	-
Sma3	chloroplast stroma	GO:0009570	Cellular Component	-
Sma3	chloroplast envelope	GO:0009941	Cellular Component	-
Sma3	glutathione peroxidase activity	GO:0004602	Molecular Function	-
Sma3	selenium binding	GO:0008430	Molecular Function	-
Sma3	phospholipid-hydroperoxide glutathione peroxidase activity	GO:0047066	Molecular Function	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	abscisic acid mediated signaling pathway	GO:0009738	Biological Process	-
Sma3	embryo development ending in seed dormancy	GO:0009793	Biological Process	-
Sma3	response to hydrogen peroxide	GO:0042542	Biological Process	-
Sma3	cellular response to water deprivation	GO:0042631	Biological Process	-
Sma3	response to cadmium ion	GO:0046686	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	C2 calcium-dependent membrane targeting	IPR000008	-	-
Sma3	PWWP	IPR000313	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Glutathione peroxidase	IPR000889	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	RNA polymerase II, large subunit, CTD	IPR006569	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3		IPR012335	-	-
Sma3	Phosphoribosyltransferase C-terminal	IPR013583	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	C2 membrane targeting protein	IPR018029	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G11600.1	ATGPX6, PHGPX, LSC803, GPX6 glutathione peroxidase 6 chr4:7010021-7011330 REVERSE LENGTH=232	72%
RefSeq	Arabidopsis thaliana	NP_192897.2	glutathione peroxidase [Arabidopsis thaliana]	72%
RefSeq	Populus trichocarpa	XP_002299536.1	glutathione peroxidase [Populus trichocarpa]	79%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain