SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene44582

Length: 826 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene44582 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ribonuclease II, putative n=1 Tax=Ricinus communis RepID=B9T6X7_RICCO	-	-	0.0	54%
FL-Next	tr=Ribonuclease II, putative; Ricinus communis (Castor bean).	-	-	0.0	54%
Sma3	Ribonuclease II-like protein	-	-	1.111e-09	-

Source	Gene names
Sma3	At5g02250; GSVIVT00021326001; Os01g0841800; OsI_04386; OsJ_04037; P0406G08.3; POPTRDRAFT_819168; RCOM_0313610; T1E22_10; VITISV_026278;

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	3'-5'-exoribonuclease activity	GO:0000175	Molecular Function	-
Sma3	RNA binding	GO:0003723	Molecular Function	-
Sma3	ribonuclease activity	GO:0004540	Molecular Function	-
Sma3	rRNA processing	GO:0006364	Biological Process	-
Sma3	chloroplast organization	GO:0009658	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribonuclease II/R	IPR001900	-	0.0	-
Sma3	Peptidase S54, rhomboid	IPR002610	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G02250.1	EMB2730, RNR1, ATMTRNASEII Ribonuclease II/R family protein chr5:454902-459063 FORWARD LENGTH=803	55%
RefSeq	Arabidopsis thaliana	NP_195845.2	Ribonuclease II/R family protein [Arabidopsis thaliana]	55%
RefSeq	Populus trichocarpa	XP_002309062.1	predicted protein [Populus trichocarpa]	48%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain