SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene44545

Length: 1379 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene44545

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Glutathione S-transferase zeta class n=1 Tax=Pinus brutia RepID=D2XZY3_9CONI	-	-	80%
FL-Next	tr=Glutathione S-transferases zeta 2; Pinus brutia.	-	-	97%
Sma3	Putative uncharacterized protein	-	-	-

Source	GOs	Term	Type	Identity
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	aromatic amino acid family metabolic process	GO:0009072	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Glutathione S-transferase, C-terminal-like	IPR010987	-	-
Sma3	Glutathione S-transferase, N-terminal	IPR004045	-	-
Sma3	Glutathione S-transferase/chloride channel, C-terminal	IPR017933	-	-
Sma3	Glutathione S-transferase, C-terminal	IPR004046	-	-
Sma3	Maleylacetoacetate isomerase	IPR005955	-	-
Sma3		IPR012335	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G02380.1	ATGSTZ2, GSTZ2 glutathione S-transferase (class zeta) 2 chr2:626878-628569 FORWARD LENGTH=223	54%
RefSeq	Arabidopsis thaliana	NP_178344.1	glutathione S-transferase zeta-class 1 [Arabidopsis thaliana]	55%
RefSeq	Populus trichocarpa	XP_002328824.1	predicted protein [Populus trichocarpa]	59%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: H6UZH1

Fln msg:

Fln protein: MASFAQENPATSVTSSRLKLYSYWRSSCSWRVRIALNLKGLPYEYKAVNIVQGEQFSEEFTKLNPLQFVPTLVDGDTIVSDSLAILLYLEDKFPEHPLLPDDHHLKAISLQAASIIGSNIQPLQNLVILNLIEEKLGAEERLAWPKPFIERGFTALEKLLKDVAGKYSVGDQLTLADIFLVPQVFGARRFNVDMSKFPTLNRIDKELAELPEFQAALPARQPDAKA*

Protein Length: 228

Fln nts: GAGGAAAGTCCTTGACGTCGGGAAATGAAGTGAAGTATCAGACTTCATTTCAAACAGGCATCTACGGTTCGGAGTGACCTTGCAGTCCCTATCTTCGAACGCTCGCAATTCACTTTGTGAAGATTCGCTGATCAATTTATAACTATCGACTTATATACCGTCTCGAAACTCTATCCAATTCACAAGTTCCCGTCTCATCTCTTTGCAGCAGGCATCATCCTCACGATTGAGCTCATATATTATCATTC_-_ATGGCATCCTTTGCTCAGGAAAACCCCGCAACCAGTGTTACCTCTTCTAGACTGAAGCTGTACTCTTACTGGCGCAGTTCATGTTCTTGGCGAGTCAGGATTGCTCTCAATCTGAAAGGGTTACCATATGAGTACAAAGCAGTGAATATTGTGCAAGGAGAGCAATTTAGTGAAGAGTTTACCAAATTGAACCCCCTTCAATTTGTTCCAACACTGGTGGATGGAGATACAATTGTTTCAGATTCACTTGCCATATTGTTGTACTTGGAGGACAAATTTCCTGAACACCCACTACTCCCAGATGATCATCATTTGAAAGCAATTAGCTTACAGGCCGCCTCTATTATTGGATCAAACATACAACCTCTTCAGAACTTGGTGATCTTGAATTTGATCGAGGAGAAACTGGGAGCAGAGGAGCGTTTGGCATGGCCTAAACCGTTCATAGAGAGAGGTTTTACTGCTTTGGAGAAGTTGTTGAAAGATGTTGCAGGGAAATATTCTGTAGGAGATCAGCTTACATTAGCAGATATCTTTCTTGTCCCACAAGTTTTTGGTGCGAGGCGTTTCAACGTTGACATGTCAAAATTCCCAACTTTGAATAGAATTGACAAAGAATTAGCAGAACTTCCAGAATTCCAGGCTGCTCTGCCTGCAAGACAACCTGATGCAAAAGCATGA___TTTTACAAGGTTTGGCAGTATAATATTAAGATTTACAACTCCGTTTTTGTGTAAGTTTTACCATATTTCATATTTCATATTTCACCCCAAGCATTAATACTCTATTAGTTTGAGAGGGAGATTGCTATGACCTATTACCTTCTAATAATCTTGCAATTAGTACTTGCAGTAATGTATGTAATTGACAAAGGGGACTATCTGCTAAAATTGTGCCTAAGCAGAACATAAATTTCTTAAGGCTTTCCATACTTCATGTAAAACTACCACTTTCAATGGTTCAAACTTCAGACATTGATAAATGTGGGATTCTGCAGACAAAGTGCTATAGTTATTAAGCAATAATAATTGACAAAGGGGACTATCTGCTAAAATTGTGCCTAAGCAGAACATAAATTTCTTAAGGCTTTCCATACTTCATGTAAAACTACCACTTTCAATGGTTCAAACTTC

Fln Alignment:

CL6982Contig1___MASFAQENPATSVTSSRLKLYSYWRSSCSWRVRIALNLKGLPYEYKAVNIVQGEQFSEEFTKLNPLQFVPTLVDGDTIVSDSLAILLYLEDKFPEHPLLPDDHHLKAISLQAASIIGSNIQPLQNLVILNLIEEKLGAEERLAWPKPFIERGFTALEKLLKDVAGKYSVGDQLTLADIFLVPQVFGARRFNVDMSKFPTLNRIDKELAELPEFQAALPARQPDAKA
H6UZH1_______________MASVSQENPATSVTSSRLKLYSYWRSSCSWRVRIALNLKGLPYEYKAVNIVQGEQFSEEFTKLNPLQFVPTLVDGDTIVSDSLAISLYLEYKFPEHPLLPDDHHLKAISLQAASIIGSNIQPLQNLVVLNLIEEKLGVEERLAWPKPFIERGFTALEKLLKDVAGKYSVGDQLTLADIFLVPQVFGARRFNVDMSKFPTLNRIDKELAELPEFQAALPARQPDAKA

SSRs (tot: 1)

Start position	End position	Sequence	Length
991	1013	CATATTT CATATTT CATATTT CA	23

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain