SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene44158

Length: 1192 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene44158

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CDPK-related protein kinase (Fragment) n=1 Tax=Tradescantia virginiana RepID=O81088_TRAVR	-	-	0.0	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Sma3	Calcium-dependent protein kinase	-	-	2.217e-35	-

Source	ECs	Term	Type	e value	Identity
Sma3	Non-specific serine/threonine protein kinase.	EC:2.7.11.1	-	7.029e-21	-
Sma3	Calcium/calmodulin-dependent protein kinase.	EC:2.7.11.17	-	1.122e-16	-

Source	Gene names
Sma3	6J23.10; AK1; AT5G66210; At1g49580; At2g17290; At2g17890; At2g41140; At2g46700; At3g10660; At3g19100; At3g49370; At3g50530; At3g56760; At4g23650; At4g36070; At5g04870; At5g12180; At5g19360; At5g23580; At5g24430; At5g66210; CAMK1; CDPK; CDPK1; CDPK12; CDPK

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	peroxisomal membrane	GO:0005778	Cellular Component	-
Sma3	endoplasmic reticulum membrane	GO:0005789	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	protein kinase activity	GO:0004672	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	calmodulin-dependent protein kinase activity	GO:0004683	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	calmodulin binding	GO:0005516	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	abscisic acid mediated signaling pathway	GO:0009738	Biological Process	-
Sma3	regulation of stomatal movement	GO:0010119	Biological Process	-
Sma3	regulation of anion channel activity	GO:0010359	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Calcium-binding EF-hand	IPR002048	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	EF-hand-like domain	IPR011992	-	-
Sma3	Calmodulin-binding domain, plant	IPR012417	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	EF-hand	IPR018248	-	-
Sma3	EF-HAND 2	IPR018249	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G46700.1	ATCRK3, CRK3 CDPK-related kinase 3 chr2:19182968-19186430 REVERSE LENGTH=595	71%
RefSeq	Arabidopsis thaliana	NP_001154582.1	CDPK-related kinase 3 [Arabidopsis thaliana]	71%
RefSeq	Populus trichocarpa	XP_002320890.1	predicted protein [Populus trichocarpa]	70%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWM8

Fln msg: your sequence is shorter than subject: 327 - 589

Fln protein: LKPENFLFTTKDENSPLKAIDFGLSEFIRPDERLNDIVGSAYYVAPEVLHQSYSMEADVWSVGVITYILLCGSRPFWAHSESGIFREVLSTEPNFDDAPWPSISPEAKDFVKRLLNKDIRKRMSAAQALSHPWLCGKHVIPLDISVYKHVKAYLGCLPFKRAALKALVKSLSEDELVYLRAQFKLLQPDNDARISLENFKSALMRNSTEAMKESKVQDILNLMNLLAFKRMNFEEFCAAATNVYQLEALDHWEEVVRSAFAFFEQEGNRVISVEELAQELNVGPNAYATLHDWIRHTDGKLSFFGFTKFLHGVTWRSNRGTQCLRF*

Protein Length: 328

Fln nts: ATTTAAAACCAGAGAACTTTCTCTTCACAACAAAGGATGAAAATTCACCTTTGAAGGCTATTGATTTTGGTCTGTCAGAGTTCATTAGACCAGATGAAAGACTGAATGATATTGTAGGCAGTGCATATTATGTAGCACCAGAAGTCCTTCACCAATCATATAGTATGGAAGCAGATGTATGGAGTGTTGGTGTAATAACGTACATCTTACTATGTGGTAGTCGACCTTTCTGGGCACACTCTGAATCAGGAATTTTTCGTGAAGTTTTGAGCACTGAACCGAATTTTGATGACGCACCATGGCCTTCTATCTCTCCTGAGGCTAAGGATTTTGTGAAAAGGCTTCTTAACAAAGATATACGCAAAAGAATGAGTGCAGCTCAGGCCCTTTCTCATCCATGGCTTTGTGGGAAACATGTAATTCCATTAGATATTTCGGTGTACAAACATGTTAAAGCTTATCTCGGCTGCTTACCGTTCAAACGTGCAGCTCTCAAGGCACTGGTGAAATCATTAAGTGAGGACGAATTGGTGTACCTCAGAGCTCAGTTTAAGCTCCTGCAACCTGATAACGATGCCAGGATTTCTCTAGAAAATTTTAAATCAGCTCTAATGAGAAATTCGACAGAGGCCATGAAGGAATCCAAGGTTCAAGATATACTAAATTTGATGAATCTGCTCGCTTTCAAAAGAATGAACTTTGAGGAGTTTTGTGCTGCTGCAACAAATGTATATCAACTAGAAGCCCTTGATCATTGGGAGGAAGTTGTACGGTCTGCATTTGCGTTCTTTGAACAAGAAGGCAATAGAGTTATTTCAGTTGAAGAGTTGGCTCAGGAATTGAATGTTGGGCCAAATGCCTACGCAACTTTGCATGATTGGATTAGGCACACAGATGGGAAACTCAGCTTTTTTGGCTTCACCAAGTTTCTACATGGTGTTACATGGCGATCAAATAGGGGCACACAATGCTTACGCTTCTAG___TTATTTAACAGTTGTGATTTTTTAATTTAAATATAGATGACTTTGGTGCCTCTTTCCTGCGTTTTGGAGTGTTTCATTGGTTAACACAGGGATATCCACAGTAGTCTCCTTTCAGAATTCTTTATGGGAGTAATTTCATATGAATTCTGTGTTGCTTGAAATATCTACTTCCGTTTGTATTAAAGTGATTTTGTGGGCTGTGTACCTAG

Fln Alignment:

CL1554Contig1___LKPENFLFTTKDENSPLKAIDFGLSEFIRPDERLNDIVGSAYYVAPEVLHQSYSMEADVWSVGVITYILLCGSRPFWAHSESGIFREVLSTEPNFDDAPWPSISPEAKDFVKRLLNKDIRKRMSAAQALSHPWLCGKHVIPLDISVYKHVKAYLGCLPFKRAALKALVKSLSEDELVYLRAQFKLLQPDNDARISLENFKSALMRNSTEAMKESKVQDILNLMNLLAFKRMNFEEFCAAATNVYQLEALDHWEEVVRSAFAFFEQEGNRVISVEELAQELNVGPNAYATLHDWIRHTDGKLSFFGFTKFLHGVTWRSNRGTQ
A9NWM8_______________LKPENFLFTTKDEHAPMKAIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSMEADVWSVGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDAPWPSVSPEAKDFVKRLLNKDLRKRMTAAQALTHPWLRGQHAIPLDILIFRLVKAYIRASPLKRAALKALSKSLTENELFYLRSQFKLLEPNKDGKISLENFRLALMRNATEAMKESKVPDILNTMEHLASRRMDFEEFCAAAISIYQLEAVDRWEQIASTAYEFFEQEGNKVISVEELAREMNLAPTAHTVLHDWIRSTDGKLSFHGFTKFLHGVTVRSSTRPQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain