SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene43994

Length: 128 nt

UniGene Fasta

>sp_v3.0_unigene43994
GACACAGATATTTGCTAAGATTGACACTATAGAGGGTCTGGAGCACTTTGATGAGATCTTGCGAGAGGCGGATGGTATTATTATTTCACGGGGTCATTTAGGAATAGATCTTCCACCAGAGAAGGTAT

Ace file of the UniGene sp_v3.0_unigene43994

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Pyruvate kinase n=2 Tax=Picea sitchensis RepID=A9NUL1_PICSI	-	-	5.0e-14	90%
FL-Next	sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Sma3	Pyruvate kinase	-	-	1.672e-27	-

Source	ECs	Term	Type	e value	Identity
Sma3		EC:2.7.1.4-	-	5.885e-30	-

Source	Gene names
Sma3	AT3G52990; At2g36580; At3g52990; F8J2_160; GSVIVT00000677001; GSVIVT00010814001; LOC_Os11g05110; LOC_Os11g10980; LOC_Os12g05110; MtrDRAFT_AC139525g8v2; Os11g0148500; Os11g0216000; Os12g0145700; OsI_35105; OsI_35538; OsI_37456; OsJ_32969; OsJ_33369; OsJ_35

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	pyruvate kinase activity	GO:0004743	Molecular Function	-
Sma3	potassium ion binding	GO:0030955	Molecular Function	-
Sma3	glycolysis	GO:0006096	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Pyruvate kinase	IPR001697	-	-
Sma3	Pyruvate kinase, barrel	IPR015793	-	-
Sma3	Pyruvate kinase, alpha/beta	IPR015794	-	-
Sma3	Pyruvate/Phosphoenolpyruvate kinase	IPR015813	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G52990.1	Pyruvate kinase family protein chr3:19649046-19652237 FORWARD LENGTH=527	7.0e-18	83%
RefSeq	Arabidopsis thaliana	NP_001078275.1	pyruvate kinase [Arabidopsis thaliana]	8.0e-18	83%
RefSeq	Populus trichocarpa	XP_002326407.1	predicted protein [Populus trichocarpa]	7.0e-18	85%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PRL0

Fln msg: Distance to subject end: 235 aas, your sequence is shorter than subject: 42 - 336

Fln protein: TQIFAKIDTIEGLEHFDEILREADGIIISRGHLGIDLPPEKV

Protein Length: 43

Fln nts: GACACAGATATTTGCTAAGATTGACACTATAGAGGGTCTGGAGCACTTTGATGAGATCTTGCGAGAGGCGGATGGTATTATTATTTCACGGGGTCATTTAGGAATAGATCTTCCACCAGAGAAGGTAT

Fln Alignment:

CL22652Contig1___TQIFAKIDTIEGLEHFDEILREADGIIISRGHLGIDLPPEKV
C0PRL0_______________TQIFAKIETIEGLEHFDEILQEADGIILSRGNLGIDLPPEKV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain