SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene42750

Length: 720 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene42750 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative 3'-5' exoribonuclease, 3' partial; 3320-1 [Arabidopsis thaliana]	-	-	0.0	54%
FL-Next	tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).	-	-	0.0	60%

Source	ECs	Term	Type	e value	Identity
Sma3	Exoribonuclease II.	EC:3.1.13.1	-	2.693e-08	-

Source	Gene names
Sma3	At1g77680; At2g17510; CHLREDRAFT_147450; GSVIVT00015352001; GSVIVT00019329001; MICPUCDRAFT_723; MICPUN_58288; OSTLU_10027; OSTLU_582; Os02g0754100; OsI_08979; OsI_09834; OsJ_08422; OsJ_09271; Ot13g00880; P0627E03.8; PHYPADRAFT_191674; POPTRDRAFT_209792; P

Source	GOs	Term	Type	e value	Identity
Sma3	RNA binding	GO:0003723	Molecular Function	0.0	-
Sma3	ribonuclease activity	GO:0004540	Molecular Function	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Ribonuclease II/R	IPR001900	-	-
Sma3	2Fe-2S ferredoxin, iron-sulphur binding site	IPR006058	-	-
Sma3	Nucleotide binding protein, PINc	IPR006596	-	-
Sma3		IPR018115	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G77680.1	Ribonuclease II/R family protein chr1:29192188-29195963 REVERSE LENGTH=1055	54%
RefSeq	Arabidopsis thaliana	NP_177891.1	Ribonuclease II/R-like protein [Arabidopsis thaliana]	54%
RefSeq	Populus trichocarpa	XP_002302251.1	predicted protein, partial [Populus trichocarpa]	56%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain