SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene41396

Length: 680 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene41396 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	4-coumarate--CoA ligase-like 5 n=3 Tax=Arabidopsis RepID=4CLL5_ARATH	-	-	5.99994e-41	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	60%

Source	ECs	Term	Type	e value	Identity
Sma3	Ligases, Forming carbon-sulfur bonds, Acid--thiol ligases.	EC:6.2.1.-	-	2.137e-14	-

Source	KEGGs	Term	e value	Identity
Sma3	Geraniol degradation	00281	2.137e-14	%
Sma3	Tyrosine metabolism	00350	2.137e-14	%
Sma3	Benzoate degradation	00362	2.137e-14	%
Sma3	Fluorobenzoate degradation	00364	2.137e-14	%
Sma3	alpha-Linolenic acid metabolism	00592	2.137e-14	%
Sma3	Aminobenzoate degradation	00627	2.137e-14	%
Sma3	Propanoate metabolism	00640	2.137e-14	%
Sma3	Ethylbenzene degradation	00642	2.137e-14	%
Sma3	Carbon fixation pathways in prokaryotes	00720	2.137e-14	%
Sma3	Limonene and pinene degradation	00903	2.137e-14	%
Sma3	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	2.137e-14	%
Sma3	Biosynthesis of plant hormones	01070	2.137e-14	%
Sma3	Metabolic pathways	01100	2.137e-14	%
Sma3	Biosynthesis of secondary metabolites	01110	2.137e-14	%

Source	Gene names
Sma3	4CLL3; 4CLL4; 4CLL5; 4CLL7; At1g20490; At1g20500; At1g20510; At4g05160; C17L7.80; F5M15.17; F5M15.18; F5M15.30; GSVIVT00015553001; GSVIVT00018101001; OPCL1; PHYPADRAFT_209184; POPTRDRAFT_831184; POPTRDRAFT_837028; Ptr4CL6\|ACLL12; Ptr4CL8; VITISV_000975; V

Source	GOs	Term	Type	Identity
Sma3	peroxisome	GO:0005777	Cellular Component	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	fatty-acyl-CoA synthase activity	GO:0004321	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	ligase activity	GO:0016874	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	jasmonic acid biosynthetic process	GO:0009695	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Regulator of chromosome condensation, RCC1	IPR000408	-	0.0	-
Sma3	AMP-dependent synthetase/ligase	IPR000873	-	0.0	-

Full-Lengther Next Prediction

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain