SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene41279

Length: 715 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene41279 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytosolic aldehyde dehydrogenase RF2C n=3 Tax=Zea mays RepID=Q8S531_MAIZE	-	-	0.0	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Sma3	Aldehyde dehydrogenase	-	-	6.502e-32	-

Source	ECs	Term	Type	e value	Identity
Sma3	Aldehyde dehydrogenase (NAD(+)).	EC:1.2.1.3	-	8.9e-19	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Glycolysis / Gluconeogenesis	00010		8.9e-19	%
Sma3	Pentose and glucuronate interconversions	00040		8.9e-19	%
Sma3	Ascorbate and aldarate metabolism	00053		8.9e-19	%
Sma3	Fatty acid metabolism	00071		8.9e-19	%
Sma3	Valine, leucine and isoleucine degradation	00280		8.9e-19	%
Sma3	Lysine degradation	00310		8.9e-19	%
Sma3	Arginine and proline metabolism	00330		8.9e-19	%
Sma3	Histidine metabolism	00340		8.9e-19	%
Sma3	Tryptophan metabolism	00380		8.9e-19	%
Sma3	beta-Alanine metabolism	00410		8.9e-19	%
Sma3	Glycerolipid metabolism	00561		8.9e-19	%
Sma3	Pyruvate metabolism	00620		8.9e-19	%
Sma3	Chloroalkane and chloroalkene degradation	00625		8.9e-19	%
Sma3	Propanoate metabolism	00640		8.9e-19	%
Sma3	Limonene and pinene degradation	00903		8.9e-19	%
Sma3	Metabolic pathways	01100		8.9e-19	%
Sma3	Biosynthesis of secondary metabolites	01110		8.9e-19	%
Sma3	Retinal dehydrogenase.	EC:1.2.1.36	-	3.561e-17	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Retinol metabolism	00830		3.561e-17	%
Sma3	Metabolic pathways	01100		3.561e-17	%
Sma3	Betaine-aldehyde dehydrogenase.	EC:1.2.1.8	-	5.462e-23	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Glycine, serine and threonine metabolism	00260		5.462e-23	%

Source	Gene names
Sma3	ALD1; ALDH; ALDH10A8; ALDH1a; ALDH2; ALDH2A; ALDH2B; ALDH2B4; ALDH2B7; ALDH2C4; ALDH2a; ALDH2b; ALDH3; Aldh; Aldh 2A; Aldh1; Aldh2a; Aldh2b; At1g23800; At1g74920; At3g24503; At3g48000; BADH; BADH1; BADH2; BADH4; BBD1; Badh2; CHLREDRAFT_135609; DlBADH1; Dl

Source	GOs	Term	Type	Identity
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	mitochondrial matrix	GO:0005759	Cellular Component	-
Sma3	peroxisome	GO:0005777	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	aldehyde dehydrogenase (NAD) activity	GO:0004029	Molecular Function	-
Sma3	aldehyde dehydrogenase [NAD(P)+] activity	GO:0004030	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	betaine-aldehyde dehydrogenase activity	GO:0008802	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	aminobutyraldehyde dehydrogenase activity	GO:0019145	Molecular Function	-
Sma3	coniferyl-aldehyde dehydrogenase activity	GO:0050269	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	phenylpropanoid biosynthetic process	GO:0009699	Biological Process	-
Sma3	response to cadmium ion	GO:0046686	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Aldehyde dehydrogenase domain	IPR015590	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Aldehyde dehydrogenase, N-terminal	IPR016162	-	-
Sma3	Aldehyde dehydrogenase, C-terminal	IPR016163	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G24503.1	ALDH2C4, ALDH1A, REF1 aldehyde dehydrogenase 2C4 chr3:8919732-8923029 REVERSE LENGTH=501	57%
RefSeq	Arabidopsis thaliana	NP_566749.1	aldehyde dehydrogenase 2C4 [Arabidopsis thaliana]	57%
RefSeq	Populus trichocarpa	XP_002324977.1	predicted protein [Populus trichocarpa]	61%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain