SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene40816

Length: 1887 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene40816 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Receptor-like kinase (Fragment) n=1 Tax=Marchantia polymorpha RepID=A7VM29_MARPO	-	-	0.0	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	37%
Sma3	Putative receptor-like protein kinase	-	-	1.528e-06	-

Source	Gene names
Sma3	AT4G36180; AT4g36180; At1g75640; At4g36180; F23E13.70; GSVIVT00014494001; GSVIVT00036820001; H0404F02.1; LOC_Os10g38920; LRR-RLK; MpRLK13; MpRLK29; OSJNBa0020J04.8; OSJNBa0053C23.3; Os04g0576900; OsI_17066; OsI_34451; OsJ_15867; PHYPADRAFT_121223; PHYPADR

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	protein kinase activity	GO:0004672	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein tyrosine kinase activity	GO:0004713	Molecular Function	-
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Leucine-rich repeat, typical subtype	IPR003591	-	-
Sma3	Tyrosine-protein kinase, active site	IPR008266	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G36180.1	Leucine-rich receptor-like protein kinase family protein chr4:17120209-17123698 REVERSE LENGTH=1136	68%
RefSeq	Arabidopsis thaliana	NP_195341.2	putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana]	68%
RefSeq	Populus trichocarpa	XP_002310296.1	predicted protein [Populus trichocarpa]	71%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LPH3

Fln msg:

Fln protein: MAENFKLGLPSIIAIAVSGGVVSILVLMVLIVYLLRYIGVGKRKALKSEEDGEKEQKLVMFYSPINYQNVLEATGQFDEEHVLSRTRYGVVFKACFEDGTVLSIRRLPEGQILEESAFKKEAETLGRVKHPNLTALRGYYASGDVRLLVYDYMPNGNLATLLQEATHQDGHILNWPMRHLIALGLARGLAYLHSQLDAPIVHGDVKPGNVQFDADFEAHLSDFGLDKLATRSVDASSSKTVGSFGYVSPEAKLRGHATKEGDVYSFGIVLLELLTGRRAVMFIKDEDEEEDIVKWVKRQLQTGQISELFDPALLELDPESSEWEEFLLAVKVALLCTVLDPLDRPSMAEVVLLLEGCRVGPDMPSSDPASQTSPV*

Protein Length: 377

Fln nts: GCAGTTTTTGCAGATATAAATGATTTGTATATCAGTTTTATTTCCATTCCAGTACCCTTTGAAATCATTGTAAGTTCTGCTACTTGGGTTTTCTTCAAGGTTTTTGTTTTTGGGGATTCTGCAATATTTCAGCAGGTTGAGCACTTTGTTTTTGGGGATTTCTGCAATATTTCAGAAGTTTGTGTGCTCTGATCTGCTTGCTAGCTTCTTTCCATTTTCTGTTCGTTTTTCATGAAACTCTTTGCAGTAGACGGATTTGAGAAATGTCCACTGATATGGTCTGAAGCTTCAAAATATTAAAACA_-_ATGGCCGAGAACTTTAAACTTGGATTGCCAAGTATCATTGCCATCGCAGTCTCTGGAGGGGTGGTTTCCATCCTCGTACTTATGGTTCTGATCGTTTATCTGCTGAGATATATTGGTGTGGGGAAGAGGAAAGCACTTAAGTCAGAGGAAGATGGAGAGAAGGAGCAGAAACTTGTGATGTTTTACAGTCCAATAAACTATCAAAATGTATTAGAGGCCACTGGGCAGTTTGATGAAGAGCATGTATTGAGCAGAACAAGGTATGGAGTTGTGTTCAAGGCTTGTTTTGAAGATGGAACGGTGCTTTCAATAAGGAGATTGCCAGAGGGGCAAATATTAGAAGAGAGCGCTTTTAAGAAAGAGGCAGAAACTCTTGGAAGAGTTAAGCACCCAAATTTGACTGCATTGAGGGGGTACTATGCCAGTGGTGATGTAAGACTGTTGGTGTATGACTACATGCCTAATGGAAACTTGGCTACCCTCCTGCAAGAGGCCACACATCAAGATGGGCACATTCTCAATTGGCCTATGAGGCACCTCATTGCTCTTGGGCTGGCTCGCGGCCTCGCATACCTTCATAGCCAGTTAGATGCTCCAATTGTTCATGGAGATGTGAAGCCTGGCAATGTGCAGTTTGATGCAGATTTTGAGGCTCATCTCTCAGATTTTGGCTTGGATAAGTTGGCAACCAGGTCTGTGGATGCATCCTCCTCTAAGACTGTTGGGTCTTTTGGGTATGTTTCCCCTGAGGCTAAGTTGAGGGGACATGCAACAAAAGAGGGTGACGTTTACAGCTTTGGGATTGTTTTGTTGGAGCTTCTTACAGGGAGGAGAGCTGTTATGTTTATCAAAGATGAAGATGAGGAGGAAGATATTGTGAAGTGGGTGAAGAGGCAGTTACAGACGGGACAGATATCAGAGCTGTTTGATCCTGCCCTTTTGGAACTTGATCCCGAGTCCTCGGAGTGGGAGGAGTTCCTTCTAGCAGTTAAAGTAGCTCTGCTTTGCACTGTTCTCGATCCTCTTGACAGACCTTCAATGGCTGAAGTTGTCTTGTTGCTTGAGGGTTGCAGAGTTGGCCCAGATATGCCATCTTCAGATCCTGCCTCTCAAACTTCTCCAGTTTGA___ATATCTTTGATGATTATCATGGGGAGGATATGCAGTGGGATACTGTAAACACATACATCTTCAGGAACTTCAGAAACATTGAATTGTTAAGTTTAGCAATGCATTTTTCTTCTCCTTTGTTAGAAAAAGTTCTTGCATAGAAGGATGACTTTTGCCTTTTGTAATTGAGATTTTATTCTCTAAAAACTAGAGACAGAGATATAGGTCAATTTCAAGAAAATCTCGAAAGAGATTCAAGGAAGGGCTCTATAGAAATGGCAGGTAGGATGGAATTGAGTGACCTTAGCAGGTCATTTTATTGTCATGGAAAGATTGGTGATTGTTATAATGCAACAATATGGCTTATTATTGTTGCACCACCAACAGAAATAAGGGCAACACCTCTGTGCCTTTTCATTTGTAGATTGTTTGGCAGATTTTAAATATAAATAGTATTTTGCAATAACAAACATAGT

Fln Alignment:

CL5132Contig1___KLVMFYSP----INYQNVLEATGQFDEEHVLSRTRYGVVFKACFEDGTVLSIRRLPEGQILEESAFKKEAETLGRVKHPNLTALRGYYASGDVRLLVYDYMPNGNLATLLQEATHQDGHILNWPMRHLIALGLARGLAYLHSQLDAPIVHGDVKPGNVQFDADFEAHLSDFGLDKLATRSVDASSSKTVGSFGYVSPEAKLRGHATKEGDVYSFGIVLLELLTGRRAV--MFIKXXXXXXDIVKWVKRQLQTGQISELFDPALLELDPESSEWEEFLLAVKVALLCTVLDPLDRPSMAEVVLLLE
B8LPH3_______________KMVLFKSSGKSSVTSETLLKKTLSLTNKDIIGTGGYGTVYKLVIDEHTVFAIKRLTRNSIDQQRGFERELDAMGDIKHRNVVTLRGYYSSSHVNLLVYDLMQNGSLDGILHSRSPNKVS-LDWAARNKIALGSARGIAYLHHDCIPHIIHRDIKSSNILLDEEMEARISDFGLATLINPDQTHVSTIVAGTFGYLAPEYVETGRATEKGDVYSYGVVLLELITGKRPTDEAFVE---KGNNIVTWIRALVEDGCEEHAFDPDLVDVLTRREMKEAFI----VAYNCLNQNPSERPTMAQVVKMLE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain