SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene40690

Length: 2144 nt

UniGene Fasta

>sp_v3.0_unigene40690
CTTTAAATATGTAGACACATGTCCAATGCCAAAATATTCTGACAGAAGAATAGAGCACCTCTGCGGACCGTTGAGCATGCCAAGAATGAGCTAACTCAGAGTCCTTTCGCTTGAATTCCAGATGAAGCATGCAACAATGGATACGAGAGGAGCATATATATACCCTTCCAGGTTTCCTTTTGTATACACAGGGAAAGTCTTTCGAGCTGTTCGAAGTGTTGGCATGTCTGGGCTCTCTGCCATTCTGGTTGTCCTACTGTTCATTTTGTATTGTTGCAACGTAGCAGTCCCTGTTGGGTTTCTCCGGTATGCAGGCCCTGTGAAACTCGGCTCTGTTGGAGATAGTAACAATTGGAACGCCACCGATCTGTCTCCTAACTTTTCTTCACGACCCACTTCATATTTTCTGGAGAAGGAGCCCAGAAATGAAACATTGAGGCATGACTTTGAAGAAAGAATTGAGAATTCTACAGTTGAAGGTATGGAAAAAATTGCGAGTAATGTCAATGGGGTTGTGCAATCTGGTGATTGTGATTTTTCTGTGGGCTCGTGGGTGTGGGACGATTCCTATCCCCTGTATGAGTCTCGCAACTGCCCTTTTCTCGATGGAGGATTTCGATGTCAGGAAAATGGCAGGCCTGATAGTGATTACTTGAAATGGCGATGGCAGCCCTCTCACTGTGATCTCCCAAGGTTCAATGCCAGCGACTTCTTGGAGAGGATTCGCAACAGACGTGTAGTGTTTGTGGGTGATTCCATTGGGAGGAACCAATGGGAGTCTCTGATTTGCATGCTTGCAGAAGCAATTCCGAACAAGAATCAGATTTATGAAGTCAATGGAAATCCCATCACAAAACACAAGGGATTTCTGTCCTTCAGATTTGTAGATTACAATTGTACAATAGAGTATTACAGGGCACCATTTCTGGTTTTCCAGGGCAGCCCGCCTAGAGGAGCTCCTCATAAGGTCCGAACCACACTGAAAGTCGACACCCTAGATTATACTTCACATCTTTGGTCTAATGGGGATGTGCTCATCTTCAACACAGGACACTGGTGGAACTATGAGAAGACGATTAGAGGGGGTTGTTATTTCCAGGAGGGAAATACTGTGGACATGAAGATGGATGTCGAAACTGCACTCAGGAGAGCAATGAAGACATGGGCTAAATGGGTCCGCCAGCATGCCAAATCTGAGAAAACCCATGTGTTCTTGCGCAGCTATGCTCCTGTTCACTTCAGAGGAGGGTCATGGAACACTGGAGGGCAGTGTCATAAGGAAACTTGGCCAGAGTTTAATTCTACTTGGTTTCAATGGGAGCCAGTAAGTAACCAGATCATGTCTGAAGCAATCAGACAACTCAATGGCAAGAAGAATGTGCAGTTATTAAACATAACATATTTGACCGAATTCAGGAAGGATGGTCATTCCTCATTGTACTATTTAGAGGATGGGCATGGGCCAGCTCCACTCCACAGGCAAGATTGCAGCCACTGGTGTCTACCTGGGGTCCCGGACACATGGAATCATCTTCTTTATGGTTACCTGCTTGCCAATGGATATGAAACAGATAGGAGCAAATGAGTGAGCAAGGGATAACATTTTTAAGTAACCTACATTTCTGGATGGTGGAAATTTGTTTCCCGAGTACCACACCCCACAAAATGGGAGGTGAATTGTTAAATTAATTTCATAAACAGCAAGAATATTTGCTGATAAGAAGAGTTCCTTGTACTTGGCACATACCCCATGAGCCAGGGCTGAGATGGCATTCTTTTGGAGAATGAAATAATAATTTGCAGTAGTGGTAGATTGGAAAAAAATGAACTCTGTAAGTGGAAATTCATGACCCTTCATGCAATTGTGCTTAAAGTTGGGCCATATCCTCAGAGATCATGGTTTTTCTCTAAGAAAAAAATATCATGGCTTCATTTAATTAACATAAAGTAGCATGGCCAGAACATGGCCAGACCATGTGCATGCGAACATAAAGTAGCATGGCCAGACCATGTGCATGTGAAGCAGAAACCACATTTTTTTGTTTTCTTCCACCATTGGGGTTTGCTTGTTAGAACCTCTTGTATTTCATAAAGAAGAACTCAGGCCCGTGTAAACACATGAATTGTACAAATTACACGAGAAT

Ace file of the UniGene sp_v3.0_unigene40690

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	protein trichome birefringence-like 11 [Arabidopsis thaliana] gb\|AAX23913.1\| hypothetical protein At5g19160 [Arabidopsis thaliana] gb\|AAZ52758.1\| expressed protein [Arabidopsis thaliana] gb\|AAZ52759.1\| expressed protein [Arabidopsis thaliana] gb\|AED92663.	-	-	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	81%
Sma3	Putative uncharacterized protein	-	-	-

Source	InterPros	Term	Type	e value	Identity
Sma3		IPR004253	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G19160.1	TBL11 TRICHOME BIREFRINGENCE-LIKE 11 chr5:6430725-6432456 FORWARD LENGTH=464	56%
RefSeq	Arabidopsis thaliana	NP_197417.1	protein trichome bi	56%
RefSeq	Populus trichocarpa	XP_002322809.1	predicted protein, partial [Populus trichocarpa]	54%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LL59

Fln msg:

Fln protein: MKHATMDTRGAYIYPSRFPFVYTGKVFRAVRSVGMSGLSAILVVLLFILYCCNVAVPVGFLRYAGPVKLGSVGDSNNWNATDLSPNFSSRPTSYFLEKEPRNETLRHDFEERIENSTVEGMEKIASNVNGVVQSGDCDFSVGSWVWDDSYPLYESRNCPFLDGGFRCQENGRPDSDYLKWRWQPSHCDLPRFNASDFLERIRNRRVVFVGDSIGRNQWESLICMLAEAIPNKNQIYEVNGNPITKHKGFLSFRFVDYNCTIEYYRAPFLVFQGSPPRGAPHKVRTTLKVDTLDYTSHLWSNGDVLIFNTGHWWNYEKTIRGGCYFQEGNTVDMKMDVETALRRAMKTWAKWVRQHAKSEKTHVFLRSYAPVHFRGGSWNTGGQCHKETWPEFNSTWFQWEPVSNQIMSEAIRQLNGKKNVQLLNITYLTEFRKDGHSSLYYLEDGHGPAPLHRQDCSHWCLPGVPDTWNHLLYGYLLANGYETDRSK*

Protein Length: 489

Fln nts: CTTTAAATATGTAGACACATGTCCAATGCCAAAATATTCTGACAGAAGAATAGAGCACCTCTGCGGACCGTTGAGCATGCCAAGAATGAGCTAACTCAGAGTCCTTTCGCTTGAATTCCAG_-_ATGAAGCATGCAACAATGGATACGAGAGGAGCATATATATACCCTTCCAGGTTTCCTTTTGTATACACAGGGAAAGTCTTTCGAGCTGTTCGAAGTGTTGGCATGTCTGGGCTCTCTGCCATTCTGGTTGTCCTACTGTTCATTTTGTATTGTTGCAACGTAGCAGTCCCTGTTGGGTTTCTCCGGTATGCAGGCCCTGTGAAACTCGGCTCTGTTGGAGATAGTAACAATTGGAACGCCACCGATCTGTCTCCTAACTTTTCTTCACGACCCACTTCATATTTTCTGGAGAAGGAGCCCAGAAATGAAACATTGAGGCATGACTTTGAAGAAAGAATTGAGAATTCTACAGTTGAAGGTATGGAAAAAATTGCGAGTAATGTCAATGGGGTTGTGCAATCTGGTGATTGTGATTTTTCTGTGGGCTCGTGGGTGTGGGACGATTCCTATCCCCTGTATGAGTCTCGCAACTGCCCTTTTCTCGATGGAGGATTTCGATGTCAGGAAAATGGCAGGCCTGATAGTGATTACTTGAAATGGCGATGGCAGCCCTCTCACTGTGATCTCCCAAGGTTCAATGCCAGCGACTTCTTGGAGAGGATTCGCAACAGACGTGTAGTGTTTGTGGGTGATTCCATTGGGAGGAACCAATGGGAGTCTCTGATTTGCATGCTTGCAGAAGCAATTCCGAACAAGAATCAGATTTATGAAGTCAATGGAAATCCCATCACAAAACACAAGGGATTTCTGTCCTTCAGATTTGTAGATTACAATTGTACAATAGAGTATTACAGGGCACCATTTCTGGTTTTCCAGGGCAGCCCGCCTAGAGGAGCTCCTCATAAGGTCCGAACCACACTGAAAGTCGACACCCTAGATTATACTTCACATCTTTGGTCTAATGGGGATGTGCTCATCTTCAACACAGGACACTGGTGGAACTATGAGAAGACGATTAGAGGGGGTTGTTATTTCCAGGAGGGAAATACTGTGGACATGAAGATGGATGTCGAAACTGCACTCAGGAGAGCAATGAAGACATGGGCTAAATGGGTCCGCCAGCATGCCAAATCTGAGAAAACCCATGTGTTCTTGCGCAGCTATGCTCCTGTTCACTTCAGAGGAGGGTCATGGAACACTGGAGGGCAGTGTCATAAGGAAACTTGGCCAGAGTTTAATTCTACTTGGTTTCAATGGGAGCCAGTAAGTAACCAGATCATGTCTGAAGCAATCAGACAACTCAATGGCAAGAAGAATGTGCAGTTATTAAACATAACATATTTGACCGAATTCAGGAAGGATGGTCATTCCTCATTGTACTATTTAGAGGATGGGCATGGGCCAGCTCCACTCCACAGGCAAGATTGCAGCCACTGGTGTCTACCTGGGGTCCCGGACACATGGAATCATCTTCTTTATGGTTACCTGCTTGCCAATGGATATGAAACAGATAGGAGCAAATGA___GTGAGCAAGGGATAACATTTTTAAGTAACCTACATTTCTGGATGGTGGAAATTTGTTTCCCGAGTACCACACCCCACAAAATGGGAGGTGAATTGTTAAATTAATTTCATAAACAGCAAGAATATTTGCTGATAAGAAGAGTTCCTTGTACTTGGCACATACCCCATGAGCCAGGGCTGAGATGGCATTCTTTTGGAGAATGAAATAATAATTTGCAGTAGTGGTAGATTGGAAAAAAATGAACTCTGTAAGTGGAAATTCATGACCCTTCATGCAATTGTGCTTAAAGTTGGGCCATATCCTCAGAGATCATGGTTTTTCTCTAAGAAAAAAATATCATGGCTTCATTTAATTAACATAAAGTAGCATGGCCAGAACATGGCCAGACCATGTGCATGCGAACATAAAGTAGCATGGCCAGACCATGTGCATGTGAAGCAGAAACCACATTTTTTTGTTTTCTTCCACCATTGGGGTTTGCTTGTTAGAACCTCTTGTATTTCATAAAGAAGAACTCAGGCCCGTGTAAACACATGAATTGTACAAATTACACGAGAAT

Fln Alignment:

CL2864Contig1___RGAYIYPSRFPFVYTGKVFRAVRSVGMSGLSAILVVLLFILYCCNVAVPVGFLRYAGPVKLGSVGDSNNWNATDLSPNFSSRPTSYFLEKEPRNETLRHDFEERIENSTVEGMEKIASNVNGVVQSGDCDFSVGSWVWDDSYPLYESRNCPFLDGGFRCQENGRPDSDYLKWRWQPSHCDLPRFNASDFLERIRNRRVVFVGDSIGRNQWESLICMLAEAIPNKNQIYEVNGNPITKHKGFLSFRFVDYNCTIEYYRAPFLVFQGSPPRGAPHKVRTTLKVDTLDYTSHLWSNGDVLIFNTGHWWNYEKTIRGGCYFQEGNTVDMKMDVETALRRAMKTWAKWVRQHAKSEKTHVFLRSYAPVHFRGGSWNTGGQCHKETWPEFNSTWFQWEPVSNQIMSEAIRQLNGKKNVQLLNITYLTEFRKDGHSSLYYLEDGHGPAPLHRQDCSHWCLPGVPDTWNHLLYGYLLANGYETDRSK*VSKG
B8LL59_______________KSCWVQPSRILVAYTVRICRTVRSATISWLSAILVVLLLVLYFGISAVPVGFLMYTSPLKLSSIADSNNKNTTTLSPKFSARSTSYNLQKEPRNETSRHDFERGNENSTVQGLE-IVKKGNEVVQSGECDFSVGSWVWDDSYSLYESRNCPFLDGGFRCQENGRPDSDYLKWRWQPSHCDLPRFNANTFLERIRNSRVVFVGDSIGRNQWESLICMLAEAIPNKARIYEVNGNPITKHKGFLSFKFEDYNCTVEYYRAPFLVFEGRPPRGAPPGVRTTLKVDAMDYTSHLWSNGDVLIFNTGHWWNYEKTIRRGCYFQEGNTVDMKMDVETALRRAMKTWVQWVLQHAKSEKTHVFLRSHSPVHFRGGSWNTGGQCHKETWPEVNSTWFQREPISNQIMSEAIKQLNGKKNAQLLNITYLTEFRKDAHSSLYYLGEGHGPAPTYRQDCSHWCLPGVPDTWNHLLYGYLLANGYATNRSTGISRG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain