SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene40617

Length: 1322 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene40617 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	glycosyltransferase [Medicago truncatula]	-	-	0.0	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	47%
Sma3	Glycosyltransferase	-	-	1.804e-08	-

Source	Gene names
Sma3	At2g41640; At2g41640/T32G6.16; At3g10320; B1111E11.20; F14P13.8; F28O9.230; GSVIVT00025625001; OJ1126_G08.49; OJ1477_F01.102; OJ1764_D01.5; Os01g0498300; Os05g0391600; Os07g0657400; OsI_02077; OsI_07024; OsI_19837; OsI_19838; OsI_27175; OsJ_01912; OsJ_184

Source	GOs	Term	Type	e value	Identity
Sma3	transferase activity, transferring glycosyl groups	GO:0016757	Molecular Function	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycosyltransferase AER61, uncharacterised	IPR007657	-	0.0	-
Sma3	Superoxide dismutase, copper/zinc, binding site	IPR018152	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G41640.1	Glycosyltransferase family 61 protein chr2:17360654-17362391 FORWARD LENGTH=500	54%
RefSeq	Arabidopsis thaliana	NP_565952.1	Glycosyltransferase family 61 protein [Arabidopsis thaliana]	54%
RefSeq	Populus trichocarpa	XP_002323324.1	predicted protein [Populus trichocarpa]	56%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LR53

Fln msg: your sequence is shorter than subject: 343 - 456

Fln protein: YHCLSSGINAEYAGNVYHEFNDGLLPLYITSQHLQGEVVFIILEYHEWWMMKYQDIVKQLSKYPVLDFRGDKKVHCFPEMIVGMKIHDELTVNSSLMKDGKTIRDFQSLLAKAYAPPKLSPMAGFTNFINESSSVPLYGLNSTSAYMNISNVLVPSSLKPKLVIISRPKSRVMLNQNEIVLLAEKIGFQVEILNPKPTTEMVEMFRILNSCDVMLGVHGAAMTHFLLMRPGSVFIQIVPLGTDWAAATYYGEPAMKLGLKYIEYKIVPEESSLYESYERNDPVLTDPDSINRQGWWETKKVYLDGQNVRPSLKRLKKRLVSAFTYSLSTAHARTEMGNLQKT*

Protein Length: 344

Fln nts: TACCACTGCTTAAGCAGTGGTATCAACGCAGAGTACGCGGGAAACGTTTACCATGAATTCAACGATGGTTTATTGCCTCTCTATATAACTTCACAACATCTTCAAGGGGAAGTTGTTTTCATCATTCTTGAATACCATGAGTGGTGGATGATGAAATACCAAGATATTGTGAAGCAGCTGAGCAAGTACCCAGTTCTTGATTTCAGGGGAGATAAAAAAGTTCATTGTTTTCCAGAGATGATAGTGGGGATGAAGATACATGACGAGTTAACTGTGAATTCATCGCTCATGAAAGATGGTAAGACCATCAGGGACTTTCAGTCGCTCCTTGCCAAGGCATATGCACCCCCTAAATTAAGCCCTATGGCTGGATTTACTAACTTCATTAACGAATCCTCTAGTGTTCCTCTTTATGGATTAAACAGTACTTCTGCATACATGAACATTAGCAACGTTTTAGTGCCCAGCTCTTTGAAGCCCAAATTGGTAATAATTTCTCGGCCGAAATCGAGAGTAATGCTAAACCAGAATGAAATTGTGCTATTGGCGGAGAAAATTGGGTTCCAAGTGGAAATTTTAAATCCCAAACCAACCACAGAAATGGTAGAGATGTTCAGAATTTTGAATTCATGTGATGTTATGCTGGGTGTACACGGAGCTGCCATGACACACTTTTTGTTGATGAGGCCTGGTTCTGTGTTTATACAGATAGTGCCTTTGGGTACAGACTGGGCTGCTGCTACTTATTACGGAGAGCCAGCCATGAAATTGGGACTGAAATATATAGAGTACAAAATCGTTCCAGAGGAGAGCTCTCTGTATGAAAGCTATGAGAGAAATGATCCTGTTCTTACAGACCCGGATTCCATAAACAGGCAGGGATGGTGGGAGACAAAGAAGGTGTATTTGGATGGACAGAACGTAAGACCTTCGTTGAAACGTCTAAAGAAGCGGCTTGTCAGTGCGTTTACCTATTCTCTCTCCACTGCACACGCAAGAACAGAAATGGGAAATTTGCAAAAAACTTGA___ACATCTGGTTTACTGTATTATAACAGGCTGGGAAATTGAGGCAGCGATTTGTTGGCAATGGCAGTAATTTGGCGGTGGCTACAGAGGTAATATTGGGGGTTGTTGGCCACTAATATTTGTGGAATTATAACTTTATTAATGCACTGGCGCTGTAGCGTTGCGTTGTGGGAGTGGACATACAGAGAGAAACAGAAAGATGGGAATGATATGGTGCAGTATTGGCTGACAAAATTTATGAATACGCAATTCTTTTTTGTGTGATGTCAATGAATGAATGGGAAATGAATCCAATC

Fln Alignment:

CL1451Contig1___YAGNVYHEFNDGLLPLYITSQHLQGEVVFIILEYHEWWMMKYQDIVKQLSKYPVLDFRGDKKVHCFPEMIVGMKIHDELTVNSSLMKDGKTIRDFQSLLAKAYAPPKLSPMAGFTNFINESSSVPLYGLNSTSAYMNISNVLVPSSLKPKLVIISRPKSRVMLNQNEIVLLAEKIGFQVEILNPKPTTEMVEMFRILNSCDVMLGVHGAAMTHFLLMRPGSVFIQIVPLGTDWAAATYYGEPAMKLGLKYIEYKIVPEESSLYESYERNDPVLTDPDSINRQGWWETKKVYLDGQNVRPSLKRLKKRLVSA
B8LR53_______________YTGNLYHEFNDGIIPLYITTQHLEKEVVFVIVDCHNWWLTKYDEILKQLTKYRVINFENETMVHCFPEVTAGLFIHGDLMIDPSLMFHNKSILDFRALINRAYTPHWFIPE--------------------------------PNSDQPRLTILVREGNRVILNLKEVVGLAEQLGFNVTVWKPLRTTELKTTYALLNSSHVLLGVHGAALTHFLFMRPGSVFIQVIPLGTEWAAHTYFGEPAERMGFQYIGYKIRLEESTLSHKYSKNDIILTNPRAVVQQGWAVTKQIYLESQDVIINLSRMKRVLINA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain