SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene40248

Length: 116 nt

UniGene Fasta

>sp_v3.0_unigene40248
TGCATCATACAGAACACAAGAACAGCACAGAACATTCCGAGGATGAATTGAACAAACCCTTAGAGGTTACAGTTAATTCAGGTGGAGTTGTTTTCTTTGCACTGTTTGAAGTTACT

Ace file of the UniGene sp_v3.0_unigene40248

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Os01g0311500 protein (Fragment) n=3 Tax=Oryza sativa RepID=Q0JNA2_ORYSJ	-	-	1.0e-09	82%
FL-Next	Isoform 2 of Dual specificity protein phosphatase PHS1 OS=Arabidopsis thaliana GN=PHS1	-	-	0.0	80%

Source	Gene names
Sma3	At5g23720; B1011A07.6; GSVIVT00018027001; Os01g0311500; OsI_01590; OsJ_01481; P0551A11.33; PHS1; POPTRDRAFT_575447; POPTRDRAFT_773256; RCOM_1504160;

Source	GOs	Term	Type	Identity
Sma3	intracellular	GO:0005622	Cellular Component	-
Sma3	protein tyrosine phosphatase activity	GO:0004725	Molecular Function	-
Sma3	protein tyrosine/serine/threonine phosphatase activity	GO:0008138	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	protein dephosphorylation	GO:0006470	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Dual specificity phosphatase, catalytic domain	IPR000340	-	-
Sma3	Protein-tyrosine/Dual-specificity phosphatase	IPR000387	-	-
Sma3	Actin-fragmin kinase, catalytic domain	IPR015275	-	-
Sma3	Zinc finger, C2H2-like	IPR015880	-	-
Sma3	Protein-tyrosine phosphatase, active site	IPR016130	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G23720.1	PHS1 dual specificity protein phosphatase family protein chr5:7998309-8002594 FORWARD LENGTH=929	8.0e-14	80%
RefSeq	Arabidopsis thaliana	NP_197761.2	dual specificity protein phosphatase family protein [Arabidopsis thaliana]	1.0e-13	80%
RefSeq	Populus trichocarpa	XP_002318165.1	predicted protein [Populus trichocarpa]	1.0e-13	82%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q75QN6-2

Fln msg: Distance to subject end: 757 aas, your sequence is shorter than subject: 38 - 845

Fln protein: HHTEHKNSTEHSEDELNKPLEVTVNSGGVVFFALFEVT

Protein Length: 39

Fln nts: TGCATCATACAGAACACAAGAACAGCACAGAACATTCCGAGGATGAATTGAACAAACCCTTAGAGGTTACAGTTAATTCAGGTGGAGTTGTTTTCTTTGCACTGTTTGAAGTTACT

Fln Alignment:

CL20643Contig1___HHTEHKNSTEHSEDELNKPLEVTVNSGGVVFFALF
Q75QN6-2_____________HHTEHSSSTDHSEEDQSKPLEVTVNSGGVVFFALF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain