SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene40115

Length: 150 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene40115

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	FAP multi-domain protein	-	-	1.0e-16	56%
Sma3	Glycine-rich protein	-	-	3.191e-13	-

Source	Gene names
Sma3	APG; AT1G49750; AT4g13340; AT4g22020; AT4g36230; At1g05135; At1g20130; At1g49750; At2g18115; At2g32690; At2g36120; At3g17050; At3g17110; At3g20470; At3g22800; At4g01985; At4g13340; At5g07740/At5g07750; At5g46730; B1103C09.1-1; B1103C09.1-2; B1147B12.7-1;

Source	GOs	Term	Type	Identity
Sma3	extracellular region	GO:0005576	Cellular Component	-
Sma3	extracellular space	GO:0005615	Cellular Component	-
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	myosin complex	GO:0016459	Cellular Component	-
Sma3	flagellum	GO:0019861	Cellular Component	-
Sma3	outer membrane	GO:0019867	Cellular Component	-
Sma3	nucleotide binding	GO:0000166	Molecular Function	-
Sma3	nucleic acid binding	GO:0003676	Molecular Function	-
Sma3	DNA binding	GO:0003677	Molecular Function	-
Sma3	RNA binding	GO:0003723	Molecular Function	-
Sma3	motor activity	GO:0003774	Molecular Function	-
Sma3	actin binding	GO:0003779	Molecular Function	-
Sma3	metalloendopeptidase activity	GO:0004222	Molecular Function	-
Sma3	ribonuclease III activity	GO:0004525	Molecular Function	-
Sma3	chitinase activity	GO:0004568	Molecular Function	-
Sma3	phosphoprotein phosphatase activity	GO:0004721	Molecular Function	-
Sma3	scavenger receptor activity	GO:0005044	Molecular Function	-
Sma3	structural constituent of cell wall	GO:0005199	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	sugar binding	GO:0005529	Molecular Function	-
Sma3	ATP-dependent helicase activity	GO:0008026	Molecular Function	-
Sma3	chitin binding	GO:0008061	Molecular Function	-
Sma3	hedgehog receptor activity	GO:0008158	Molecular Function	-
Sma3	cysteine-type peptidase activity	GO:0008234	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	lipase activity	GO:0016298	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	metal ion binding	GO:0046872	Molecular Function	-
Sma3	transition metal ion binding	GO:0046914	Molecular Function	-
Sma3	chitin catabolic process	GO:0006032	Biological Process	-
Sma3	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	-
Sma3	RNA processing	GO:0006396	Biological Process	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	-
Sma3	lipid transport	GO:0006869	Biological Process	-
Sma3	exocytosis	GO:0006887	Biological Process	-
Sma3	defense response	GO:0006952	Biological Process	-
Sma3	cellular cell wall organization	GO:0007047	Biological Process	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	cellular component organization	GO:0016043	Biological Process	-
Sma3	cell wall macromolecule catabolic process	GO:0016998	Biological Process	-
Sma3	metal ion transport	GO:0030001	Biological Process	-
Sma3	actin cytoskeleton organization	GO:0030036	Biological Process	-
Sma3	vesicle docking	GO:0048278	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Kringle	IPR000001	-	-
Sma3	Prohibitin	IPR000163	-	-
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	PWWP	IPR000313	-	-
Sma3	RNA recognition motif domain	IPR000504	-	-
Sma3	Glutamine amidotransferase, class-II	IPR000583	-	-
Sma3	ROK	IPR000600	-	-
Sma3	Glycoside hydrolase, family 19, catalytic	IPR000726	-	-
Sma3	Sterol-sensing domain	IPR000731	-	-
Sma3	Ricin B lectin domain	IPR000772	-	-
Sma3	Ribonuclease III domain	IPR000999	-	-
Sma3	Chitin-binding, type 1	IPR001002	-	-
Sma3	Lipase, GDSL	IPR001087	-	-
Sma3	Band 7 protein	IPR001107	-	-
Sma3	Speract/scavenger receptor	IPR001190	-	-
Sma3	Peptidase M12B, ADAM/reprolysin	IPR001590	-	-
Sma3	Myosin head, motor domain	IPR001609	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Helicase, C-terminal	IPR001650	-	-
Sma3	Blood coagulation inhibitor, Disintegrin	IPR001762	-	-
Sma3	Zinc finger, CCHC-type	IPR001878	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3	Cold-shock protein, DNA-binding	IPR002059	-	-
Sma3	Cell surface receptor IPT/TIG	IPR002909	-	-
Sma3	Actin-binding FH2/DRF autoregulatory	IPR003104	-	-
Sma3	Polymorphic outer membrane protein repeat	IPR003368	-	-
Sma3	Patched	IPR003392	-	-
Sma3	Apple-like	IPR003609	-	-
Sma3		IPR003612	-	-
Sma3	Peptidase C48, SUMO/Sentrin/Ubl1	IPR003653	-	-
Sma3	Pistil-specific extensin-like protein	IPR003882	-	-
Sma3	Transposon, En/Spm-like	IPR004242	-	-
Sma3	Protein of unknown function DUF285, lipoprotein predicted	IPR005046	-	-
Sma3	Peptidase, metallopeptidase	IPR006026	-	-
Sma3	Outer membrane autotransporter barrel	IPR006315	-	-
Sma3	RNA polymerase II, large subunit, CTD	IPR006569	-	-
Sma3	Parallel beta-helix repeat	IPR006626	-	-
Sma3	Inorganic pyrophosphatase	IPR008162	-	-
Sma3	Lipase, GDSL, active site	IPR008265	-	-
Sma3	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding	IPR008274	-	-
Sma3	Peptidase M11, gametolysin	IPR008752	-	-
Sma3	Exocyst complex component Sec10	IPR009976	-	-
Sma3	Glycine rich protein	IPR010800	-	-
Sma3	Cold shock protein	IPR011129	-	-
Sma3	DNA/RNA helicase, DEAD/DEAH box type, N-terminal	IPR011545	-	-
Sma3	Tyrosine-protein kinase ephrin type A/B receptor-like	IPR011641	-	-
Sma3	Bacterial surface protein 26-residue repeat	IPR011889	-	-
Sma3	EF-hand-like domain	IPR011992	-	-
Sma3	Nucleic acid-binding, OB-fold	IPR012340	-	-
Sma3	Nucleotide-binding, alpha-beta plait	IPR012677	-	-
Sma3		IPR013084	-	-
Sma3	Phospholipase A2, active site	IPR013090	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	-
Sma3	FIST domain, N-terminal	IPR013702	-	-
Sma3	Plant lipid transfer protein/hydrophobic protein helical domain	IPR013770	-	-
Sma3	Peptidase M10B, serralysin, C-terminal	IPR013858	-	-
Sma3	Helicase, superfamily 1/2, ATP-binding domain	IPR014001	-	-
Sma3	Tensin phosphatase, C2 domain	IPR014020	-	-
Sma3		IPR014021	-	-
Sma3	Domain of unknown function DUF1929	IPR015202	-	-
Sma3	Actin-binding FH2	IPR015425	-	-
Sma3		IPR015465	-	-
Sma3	Galactose oxidase, beta-propeller	IPR015916	-	-
Sma3	C-type lectin-like	IPR016186	-	-
Sma3	Speract/scavenger receptor-related	IPR017448	-	-
Sma3		IPR018059	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	EF-HAND 2	IPR018249	-	-
Sma3	Chitin-binding, type 1, conserved site	IPR018371	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain