SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene38883

Length: 2472 nt

UniGene Fasta

>sp_v3.0_unigene38883
ATTCATTGGATCCATAATCATTGAAGTGTTGGTGATCGTGGGACATATGAAACTCTGCATTTACTGCTCCTTCCGACCTCTCTCTTCTTCGTTCCACTGTTCTGAATTCGTTAGACACACACCTTTTCGGATCAAGAGAGGAGTTCAGTTCAGTTTTGCTGTAGCCAGAGCTCGCGATCCTTGCATTTGAGTGGAATTATGGCCCAGTTAATAAGAACAAGGAGAAACTTTTCAACTGCCACTGGAAGGTTGCAGACATGGCTTCTGCCTCCTTTCTTCACTGATGATGCTGCTGGTCGCATTAGCAGGCGGCCTATGATAACTGAGGCCACGCGCCCAACTATTGTCCACAAGCGCGGCCACGACATTCTCCACGATCCCCGGCTTAACAAGGGCACAGCTTTCCCAATGACAGAGAGAGACCGGCTTGATCTACGTGGCCTTCTGCCACCAAATGTCATGACTTGGAAGCAACAAATTGATCGCTTTAAGGTTGATCTGAAAAGACTGGAAGAACATGCTAAAGATGGACCATCTGACAATACTGCTTTAGCTAAGTGGAGAATTCTGAACAGATTGCATGACAGGAATGAGACAATGTATTACAAGGTTTTAATTGAAAACATTGCAGAGTATGCGCAAATAATATACACACCTACCGTTGGTATGGTCTGTCAAAACTACAGTGGTTTGTATAGACGGCCGAGAGGAATGTATTTTAGCACTGCTGATAAGGGGGAAATGATGTCAATGGTCTATAACTGGCCTGCAGAACAGGTTGACATGATTGTGGTTACGGACGGAAGTAGAATATTGGGACTTGGAGATCTTGGAGTACAGGGCATTGGTATTGCCATTGGAAAGTTAGACTTGTACGTTTCTGCTGCAGGCATAAATCCTCAAAGGGTGCTTCCTGTGATGATTGATTGTGGAACAAATAATGAGAAGCTCCTTGGAGATCCTTTATATCTAGGATTGCCAATCCGTAGACTTGATGGTGAAGAATATGTATCAGTTATTGATGAATTCATGGAAGCAGTTTTTTCACGGTGGCCAAAAGTCATAGTGCAGTTTGAGGACTTCCAAAGCAAGTGGGCTTTCAAATTGCTACAACGGTATCGAAATCAATACAGAATGTTTAATGATGATGTTCAGGGAACTGCAGGAGTTGCTATTGCAGGTCTCCTAGGAGCGGTAAGAGCACAAGGCCGACCAATATCAGACTTTGCAAAACAAAAGATTGTTGTTGCTGGTGCAGGAAGTGCAGGAATAGGAGTCCTAAATGCTGCAAGAAAAGCAATGGCAAGACTCTTAGGTGGTACAGAATCTGCCTTAGAAAATGCAAGGTACCAGTTCTGGGTACTTGATGCAATGGGTTTGGTTACAGAAGCACGGAATGACATTGACCCTGATGTTGCACCATTTGCCAGAAAAGTCGAAGAACTAGGTTCGCAAGATTTAACAGAAGGTTCCAAGCTTACTGAAGTGGTAAAAAAAGTTAGGCCAGATGTGTTGATTGGATTAACTGCAGTTGGAGGATTATTTACAAAAGAGGTTTTGGAAGCCCTTAAAGAATCAACTTGTGCAAGGCCAGCAGTTTTCGCAATGTCAAATCCAACTACCAATGCCGAATGCACACCCGAGCAAGCTTTCAACACTGTGGGACACCAAATAGTTTTTGCAAGCGGAAGTCCATTTCCTGACGTGGATCTTGGAAATGGCCAAATTGGACATTCCAACCAAGGAAACAATATGTACCTTTTCCCAGGGATTGGGCTGGGTACACTTCTATCTGGTGCTCGTATCATTTCAGATGGCATGCTACAAGCTGCAGCAGAATGCCTAGCTGAATGCATGACAGAAGAAGAAGTGCAAAAGGGAATTATATACCCCTCAACATCCAGGATTCGCAAGATTACAATGGAGATAGCTACAGCTGTTGCGAGAGAAGCAGTGGCAGAGGAGCTTGCAGAGGGCTACCAAGAGAAAGATGCCAGAGAGCTTCAACGCATGTCAAAGGAAGAGACTTTGGAGCATGTGGAAAAGCATATGTGGGTTCCAAACTATGCACCATTGGTTTACCATTAGCAATGAATCCGATCAATGGCAAAAGGGAAGAAATAATCAGTAGCTTTGCAGATTCGTTCCTAAGTTGTTACTATGAAATGAAAATTGTTCGACATATGTACATCTCATTATTCTTGGAGTAGCTGGAGGATTTGTATTCGTGACAGCCTATTTTGCGTAAGAAGCAGGTTGTGGCGTGAATGTCTCAAGTTGCAATGAAAGAATATTACACATTACATGTATTTGATTCAATTATGTCCATTACTTGTTTTCTCTCCGTACTGTAATGAGTATCGTGCTTTCTATACTAGGGCTATACTCTCTAGAATGCTGGTTCACTTAATAAATGCATCTTTTTTTCCTTGTAAACAATTCTTTTCACCGTCTTCTAACCCTGTATGATAC

Ace file of the UniGene sp_v3.0_unigene38883

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI	-	-	83%
FL-Next	sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Sma3	Malic enzyme	-	-	-

Source	InterPros	Term	Type	Identity
Sma3	Malic enzyme, conserved site	IPR015884	-	-
Sma3	Malic enzyme, N-terminal	IPR012301	-	-
Sma3	Malic enzyme, NAD-binding	IPR012302	-	-
Sma3	Malic oxidoreductase	IPR001891	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G13560.1	NAD-ME1 NAD-dependent malic enzyme 1 chr2:5650089-5655103 FORWARD LENGTH=623	75%
RefSeq	Arabidopsis thaliana	NP_178980.1	NAD-dependent malic enzyme 1 [Arabidopsis thaliana]	75%
RefSeq	Populus trichocarpa	XP_002326881.1	predicted protein [Populus trichocarpa]	79%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LMR7

Fln msg:

Fln protein: MAQLIRTRRNFSTATGRLQTWLLPPFFTDDAAGRISRRPMITEATRPTIVHKRGHDILHDPRLNKGTAFPMTERDRLDLRGLLPPNVMTWKQQIDRFKVDLKRLEEHAKDGPSDNTALAKWRILNRLHDRNETMYYKVLIENIAEYAQIIYTPTVGMVCQNYSGLYRRPRGMYFSTADKGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVSAAGINPQRVLPVMIDCGTNNEKLLGDPLYLGLPIRRLDGEEYVSVIDEFMEAVFSRWPKVIVQFEDFQSKWAFKLLQRYRNQYRMFNDDVQGTAGVAIAGLLGAVRAQGRPISDFAKQKIVVAGAGSAGIGVLNAARKAMARLLGGTESALENARYQFWVLDAMGLVTEARNDIDPDVAPFARKVEELGSQDLTEGSKLTEVVKKVRPDVLIGLTAVGGLFTKEVLEALKESTCARPAVFAMSNPTTNAECTPEQAFNTVGHQIVFASGSPFPDVDLGNGQIGHSNQGNNMYLFPGIGLGTLLSGARIISDGMLQAAAECLAECMTEEEVQKGIIYPSTSRIRKITMEIATAVAREAVAEELAEGYQEKDARELQRMSKEETLEHVEKHMWVPNYAPLVYH*

Protein Length: 631

Fln nts: ATTCATTGGATCCATAATCATTGAAGTGTTGGTGATCGTGGGACATATGAAACTCTGCATTTACTGCTCCTTCCGACCTCTCTCTTCTTCGTTCCACTGTTCTGAATTCGTTAGACACACACCTTTTCGGATCAAGAGAGGAGTTCAGTTCAGTTTTGCTGTAGCCAGAGCTCGCGATCCTTGCATTTGAGTGGAATT_-_ATGGCCCAGTTAATAAGAACAAGGAGAAACTTTTCAACTGCCACTGGAAGGTTGCAGACATGGCTTCTGCCTCCTTTCTTCACTGATGATGCTGCTGGTCGCATTAGCAGGCGGCCTATGATAACTGAGGCCACGCGCCCAACTATTGTCCACAAGCGCGGCCACGACATTCTCCACGATCCCCGGCTTAACAAGGGCACAGCTTTCCCAATGACAGAGAGAGACCGGCTTGATCTACGTGGCCTTCTGCCACCAAATGTCATGACTTGGAAGCAACAAATTGATCGCTTTAAGGTTGATCTGAAAAGACTGGAAGAACATGCTAAAGATGGACCATCTGACAATACTGCTTTAGCTAAGTGGAGAATTCTGAACAGATTGCATGACAGGAATGAGACAATGTATTACAAGGTTTTAATTGAAAACATTGCAGAGTATGCGCAAATAATATACACACCTACCGTTGGTATGGTCTGTCAAAACTACAGTGGTTTGTATAGACGGCCGAGAGGAATGTATTTTAGCACTGCTGATAAGGGGGAAATGATGTCAATGGTCTATAACTGGCCTGCAGAACAGGTTGACATGATTGTGGTTACGGACGGAAGTAGAATATTGGGACTTGGAGATCTTGGAGTACAGGGCATTGGTATTGCCATTGGAAAGTTAGACTTGTACGTTTCTGCTGCAGGCATAAATCCTCAAAGGGTGCTTCCTGTGATGATTGATTGTGGAACAAATAATGAGAAGCTCCTTGGAGATCCTTTATATCTAGGATTGCCAATCCGTAGACTTGATGGTGAAGAATATGTATCAGTTATTGATGAATTCATGGAAGCAGTTTTTTCACGGTGGCCAAAAGTCATAGTGCAGTTTGAGGACTTCCAAAGCAAGTGGGCTTTCAAATTGCTACAACGGTATCGAAATCAATACAGAATGTTTAATGATGATGTTCAGGGAACTGCAGGAGTTGCTATTGCAGGTCTCCTAGGAGCGGTAAGAGCACAAGGCCGACCAATATCAGACTTTGCAAAACAAAAGATTGTTGTTGCTGGTGCAGGAAGTGCAGGAATAGGAGTCCTAAATGCTGCAAGAAAAGCAATGGCAAGACTCTTAGGTGGTACAGAATCTGCCTTAGAAAATGCAAGGTACCAGTTCTGGGTACTTGATGCAATGGGTTTGGTTACAGAAGCACGGAATGACATTGACCCTGATGTTGCACCATTTGCCAGAAAAGTCGAAGAACTAGGTTCGCAAGATTTAACAGAAGGTTCCAAGCTTACTGAAGTGGTAAAAAAAGTTAGGCCAGATGTGTTGATTGGATTAACTGCAGTTGGAGGATTATTTACAAAAGAGGTTTTGGAAGCCCTTAAAGAATCAACTTGTGCAAGGCCAGCAGTTTTCGCAATGTCAAATCCAACTACCAATGCCGAATGCACACCCGAGCAAGCTTTCAACACTGTGGGACACCAAATAGTTTTTGCAAGCGGAAGTCCATTTCCTGACGTGGATCTTGGAAATGGCCAAATTGGACATTCCAACCAAGGAAACAATATGTACCTTTTCCCAGGGATTGGGCTGGGTACACTTCTATCTGGTGCTCGTATCATTTCAGATGGCATGCTACAAGCTGCAGCAGAATGCCTAGCTGAATGCATGACAGAAGAAGAAGTGCAAAAGGGAATTATATACCCCTCAACATCCAGGATTCGCAAGATTACAATGGAGATAGCTACAGCTGTTGCGAGAGAAGCAGTGGCAGAGGAGCTTGCAGAGGGCTACCAAGAGAAAGATGCCAGAGAGCTTCAACGCATGTCAAAGGAAGAGACTTTGGAGCATGTGGAAAAGCATATGTGGGTTCCAAACTATGCACCATTGGTTTACCATTAG___CAATGAATCCGATCAATGGCAAAAGGGAAGAAATAATCAGTAGCTTTGCAGATTCGTTCCTAAGTTGTTACTATGAAATGAAAATTGTTCGACATATGTACATCTCATTATTCTTGGAGTAGCTGGAGGATTTGTATTCGTGACAGCCTATTTTGCGTAAGAAGCAGGTTGTGGCGTGAATGTCTCAAGTTGCAATGAAAGAATATTACACATTACATGTATTTGATTCAATTATGTCCATTACTTGTTTTCTCTCCGTACTGTAATGAGTATCGTGCTTTCTATACTAGGGCTATACTCTCTAGAATGCTGGTTCACTTAATAAATGCATCTTTTTTTCCTTGTAAACAATTCTTTTCACCGTCTTCTAACCCTGTATGATAC

Fln Alignment:

CL3094Contig1___MITEATRPTIVHKRGHDILHDPRLNKGTAFPMTEXXXXXXXXXXPPNVMTWKQQIDRFKVDLKRLEEHAKDGPSDNTALAKWRILNRLHDRNETMYYKVLIENIAEYAQIIYTPTVGMVCQNYSGLYRRPRGMYFSTADKGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVSAAGINPQRVLPVMIDCGTNNEKLLGDPLYLGLPIRRLDGEEYVSVIDEFMEAVFSRWPKVIVQFEDFQSKWAFKLLQRYRNQYRMFNDDVQXXXXXXXXXXXXXXRAQGRPISDFAKQKXXXXXXXXXXXXXLNAARKAMARLLGGTESALENARYQFWVLDAMGLVTEARNDIDPDVAPFARKVEELGSQDLTEGSKLTEVVKKVRPDVLIGLTAVGGLFTKEVLEALKESTCARPAVFAMSNPTTNAECTPEQAFNTVGHQIVFASGSPFPDVDLGNGQIGHSNQGNNMYLFPGIGLGTLLSGARIISDGMLQAAAECLAECMTEEEVQKGIIYPSTSRIRKITMXXXXXXXXXXXXXXXXXGYQEKDARELQRMSKEETLEHVEKHMWVPNYAPLVYH
B8LMR7_______________VITEATRPTIVHRRGLDILHDPLFNKGTAFPLAERDRLGLRGLLPPSVMTWKQQIDRFMVDLKRLEEHAKDGPSDTTALAKWRILNRLHDRNETLYYKVLIDNIAEYAQIIYTPTVGLVCQNYSGLYRRPRGMYFSTADQGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAASGINPQRVLPVMIDCGTNNEKLLGDPLYLGLPIRRLDGEEYVSVIDEFMEAVFARWPNVIVQFEDFQSKWAFKLLQRYRNQYRMFNDDVQGTAGVAIAGLLGAVRAQGRPISDFAKQKIVVSGAGSAGIGVLNAARKAMARFLGGTESAFENARCQFWVLDAMGLVTEARNDIDPDVAPFARKVEELGSQGLREGSQLTEVVKKVRPDVLIGLTGIGGLFTKEVLEALKESTCVRPVVFAMSNPTSNAECTADQAFNTVGHHIVFASGSLFPDVDLGNGQIGHSNQGNNMYLFPGIGLGTLVSGARLISDGMLQAAAECLAECMTKEEVRKGIIYPSVSRIRNITMKVATAVVREAVAEDLAEGYQDKDARELQRLSKEETLEHVEKHMWVPNYSPLVYH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain